Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1325 ATGACCAAGTTTGTTCTTTTTTTGTTATGCTTTTCCTCTGCACTGAGCCTTTCAGTTTCAGAGCCCGAAGCTGTTTCTGTGAAACTTCATGCAGCTGAATCCTTCTCTGCGGGGTATATCCAGATGAAAACTGAATCAAGCTGTTCTTACTTGTTGGTTATAAGTACGAGTTGTTCATCGCCCATGTTCACAACTGATAAGATTGGTATTGCGTTTGGAGATGCTAAAGGAAACCAGGTATATGTGCCAAGACTAGATGATCCACTTTCAAAGACATTTGAGCAATGTTCTTCAGATACATTTCAGATAGATGGTGCATGTGCATCTCCCATTTGCTTTGTGTATCTTTATAGATCAGGGGAAGAGAAAGGTTGGAAGCCTGAGAGTGTGAAAATCTTTGGCTATGACTCAGAGCCTGTTACTTTTACCTTCAACACCTCCATCCCCAGTGACACATGGTATGGCTACAATGTGTGTCAGACTCCTCCTTCTCCTTCTTCTGCATTTCAACTATCCCCTCAGAAATGGCTTATGAGTTTGGTTCTAGGCTTTATTCTTAGCCTTTTGCTTCTTTAA 576 0.4132 MTKFVLFLLCFSSALSLSVSEPEAVSVKLHAAESFSAGYIQMKTESSCSYLLVISTSCSSPMFTTDKIGIAFGDAKGNQVYVPRLDDPLSKTFEQCSSDTFQIDGACASPICFVYLYRSGEEKGWKPESVKIFGYDSEPVTFTFNTSIPSDTWYGYNVCQTPPSPSSAFQLSPQKWLMSLVLGFILSLLLL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1325 191 CDD PLAT 48 161 - -
Pvu4g1325 191 PANTHER - 2 189 - -
Pvu4g1325 191 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 156 IPR036392 GO:0005515
Pvu4g1325 191 Gene3D PLAT/LH2 domain 30 155 - -
Pvu4g1325 191 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
Pvu4g1325 191 PANTHER EMBRYO-SPECIFIC PROTEIN 2 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1325 Pvu-Chr4 40073524 40075528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1325 - - gmx:100499779 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1325 4 40073524 40075528 Pvu4g1325 4 40073524 40075528 ECH
Pvu4g1325 4 40073524 40075528 Pvu7g0650 7 5590980 5598920 PCT