Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1306 ATGGCTCACCCTACCTCATCAGATCCATCCAATGATCTCAGAAAAGAAGACTGCAAGGAAAGAGATTCTCTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCGACGGTGGGAGGAGTATCACTGGCTGAAGCACCTGCGTTCAAGAAATCTCCCGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAAACTGGGAGGTTCATCTGCTTTTATTGGCAAGGTTGGAGCAGATGAATTTGGGTACATGCTGGCTGACATTTTAAAGCAAAACAATGTTGAGACTTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGTGAACGTGAATTCTTGTTTTTCCGCAATCCAAGTGCTGATATGCTCCTTCAAGAATCAGAACTTGATAAAAATCTCCTAAAGCAGGCTAGAATATTTCATTATGGTTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAACTCTAGTTGCATTCTCTCTTATGATCCAAATTTGAGATTGGCTCTGTGGCCTTCAGAAGATACTGCTCGGAAAAGCATAATGGATATATGGGATCAGGCTGATGTCATAAAGATAAGTGAGGATGAAATCACATTTTTGACAGGAGGTGATAATCCTTATGACGATAATGTTGTTTTGAAGAAACTTTTTCATCCAAATCTCAAGCTTTTAATCGTTACTGAAGGGTCACAAGGTTGCAGATATTACACCAAAGCATTTAAGGGCAGGATTGCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGTGCTGGCGATGCATTTGTTAGTGGGATTTTATACAGTATAGCTTCTGATCAAACTATTTTTCAGGATGAAAAACGTCTTAGAAAGGCTTTATATTTTGCTAATATATGTGGTGCCCTCACTGTGACTGAGAGAGGTGCAATTCCTGCACTTCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.4066 MAHPTSSDPSNDLRKEDCKERDSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKSPGGAPANVAVGISKLGGSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLLKQARIFHYGSISLIDEPCKSAHLAAMRIAKNSSCILSYDPNLRLALWPSEDTARKSIMDIWDQADVIKISEDEITFLTGGDNPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRIAGVKVKPVDTTGAGDAFVSGILYSIASDQTIFQDEKRLRKALYFANICGALTVTERGAIPALPTKEAILQFLLEAAVI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1306 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Pvu4g1306 345 CDD bac_FRK 24 326 - -
Pvu4g1306 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Pvu4g1306 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Pvu4g1306 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Pvu4g1306 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Pvu4g1306 345 Gene3D - 21 344 IPR029056 -
Pvu4g1306 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Pvu4g1306 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Pvu4g1306 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Pvu4g1306 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1306 Pvu-Chr4 39550375 39554116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1306 K00847 - gmx:100778752 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1306 4 39550375 39554116 Pvu7g0667 7 5780618 5784113 ECH
Pvu4g1306 4 39550375 39554116 Pvu4g1306 4 39550375 39554116 ECH
Pvu4g1306 4 39550375 39554116 Pvu7g0667 7 5780618 5784113 PCT