Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1291 ATGTGTCATCCAACTCTTGACGTCACCTGCAAATGCTGCTGCACCACTTCACCTCCTGATTACCAAATTTCAATCAAGGACTCAGAAGAGCAGCACCCCATAATGCTCACCAACCCTTTGATCTCCAAACTCCAAAACAACACAACACCACCACCACCTCAACTTAACACATCCACAACACCAAAAACAACACCTTCACCACCACCACAACCGATAAAAACTGTAACAGAACCAGCAAAATCACATCTCCCTGACACCATCAATGAAGTGATTTCCATATCCAAAATAGCCATCCCTATGATCCTTACTGGCCTCCTCCTCTACTGCCGCTCCATGATCTCCATGCTCTTCCTTGGCCACCTTGGAGAGCTTGCTTTGGCTGGTGGCTCCCTGGCTGTTGGCTTTGCCAACATCACTGGCTACTCAATCCTGTCTGGTCTTGCTGTAGGAATGGAGCCAATCTGTGGCCAAGCTTTTGGTGCCAAGAGGTTCACCCTCCTTGGCCTCTGCTTGCAAAGAACCATTCTTCTTCTCCTCTTCACTTCCCTCCCCATATCACTCCTTTGGCTCCACATGAAGAAAATTCTTCTCCTTTGTGGCCAGGATGAGGCCATGGCCACACAAGCCCAATCATATCTTGTTTACTCCATTCCTGACCTCATAGCACAATCTTTCTTACATCCTTTGAGAATTTACCTTAGGAGCCAATCCATTACCCTCCCTCTCACCCTCTGTGCCTCCTTGTCAATTCTCCTTCACATACCCATCAACTACTTTCTTGTGTCTCACCTCAGGCTGGGAATCAAAGGGGTGGCTCTTGGTGGGGTGTGGACAAACTTCAACCTTGTGGCTTCTTTGATTCTTTATATAGTCTTCTCTGGCACTCATAAGAAAACATGGGGTGGTTTCTCTTTTGAGTGCTTCACACAGTGGAAGTCTCTTCTCAATTTGGCTATTCCAAGCTGTGTTTCAGTGTGCTTGGAATGGTGGTGGTATGAGATCATGATTTTGTTATGTGGGCTGTTGGTGAACCCCAGGGCAACTGTGGCTTCAATGGGAATTCTGATCCAAACCACTTCTTTGCTTTACATTTTCCCTTCTTCATTGAGCTTCAGTGTGTCAACTAGAGTTGGCAACAAGCTTGGCGCACAGAAACCCTCAAAGGCGAGGCTTTCTGCCATTGTGGGGTTGTCTTGCAGTTTCGTGTCAGGTGTCCTGGCATTGGTTTTTGCTCTCATGGTCAGGAACACATGGGCTAGCATGTTCACAAAGGACAAAGAGATTATAAGTTTGACATCTATGGTGTTACCCATAATAGGCCTTTGTGAGCTTGGGAATTGCCCTCAAACAACAGGGTGTGGGGTGCTGAGAGGCACAGCAAGGCCTAAAGTTGGTGCTAACATCAACTTGGGATGTTTCTACCTTGTGGGAATGCCTGTGTCCATTTGGCTAGCTTTCTTCTCTGGCTATGATTTTCAAGGCCTCTGGCTTGGCCTTCTTGCAGCTCAAGGGTCTTGTGCAGTGTCCATGTTGGTGGTTCTGTGCAGAACTGATTGGGAATTTGAAGCCCAAAGAGCCAAGAAACTCACGGGAATGGGAGGAGCTTCTAGTGTTGATGATCACAACCATGAGGTTGATCCAGAGAAGCCACTCAAATTTGAAAGCAAGGAAGATTCTTTGGCATTATTAGCTGACTCAGATGAAAATGAACAGTGA 1716 0.4685 MCHPTLDVTCKCCCTTSPPDYQISIKDSEEQHPIMLTNPLISKLQNNTTPPPPQLNTSTTPKTTPSPPPQPIKTVTEPAKSHLPDTINEVISISKIAIPMILTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQRTILLLLFTSLPISLLWLHMKKILLLCGQDEAMATQAQSYLVYSIPDLIAQSFLHPLRIYLRSQSITLPLTLCASLSILLHIPINYFLVSHLRLGIKGVALGGVWTNFNLVASLILYIVFSGTHKKTWGGFSFECFTQWKSLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFVSGVLALVFALMVRNTWASMFTKDKEIISLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVSIWLAFFSGYDFQGLWLGLLAAQGSCAVSMLVVLCRTDWEFEAQRAKKLTGMGGASSVDDHNHEVDPEKPLKFESKEDSLALLADSDENEQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1291 571 TIGRFAM matE: MATE efflux family protein 99 496 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1291 571 MobiDBLite consensus disorder prediction 539 563 - -
Pvu4g1291 571 CDD MATE_eukaryotic 89 525 IPR045069 GO:0042910|GO:1990961
Pvu4g1291 571 Pfam MatE 99 259 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1291 571 Pfam MatE 320 482 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1291 571 PANTHER PROTEIN DETOXIFICATION 74 542 - -
Pvu4g1291 571 PANTHER MULTIDRUG RESISTANCE PROTEIN 74 542 - -
Pvu4g1291 571 MobiDBLite consensus disorder prediction 42 77 - -
Pvu4g1291 571 MobiDBLite consensus disorder prediction 54 74 - -
Pvu4g1291 571 MobiDBLite consensus disorder prediction 532 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1291 Pvu-Chr4 39248448 39250163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1291 K03327 - gmx:100787316 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1291 4 39248448 39250163 Pvu4g1291 4 39248448 39250163 ECH