Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1290 ATGATGAGGATGAGGAATAATAGTGGCAATAATAATCACAAGACAAATGGTCTTTCTTCCATCATGAATGCAGGAGGCTCAGCTGCTTGTAGATCTGAGCCTGGTTCAAAGGAATGGGAGATGAGACCAGGTGGAATGCTGGTTCAGATGAGAACCGCTGATTCGGATCGGAACCCAGTACTTGTTCCCACAATTAGAGTTAGGGTCAAGTATGGTTCAATTTACCATGAAGTAAACATTAGTTCTCAAGCTACATTTGGGGAGTTGAAGAAGATGTTGTCTGGAGTAACTGGATTACACCATGAAGACCAAAAGCTGTTTTACAAAGACAAGGAGAGGGATTCAAAGGCTTTTCTTGACATGGTTGGGGTCAAGGATAAATCCAAGATAGTGCTAGTGGAAGACCCTATTAGTCAAGAGAAGAGGTTGTTAGAGATAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCGATCTCAGCAATCAGCTTGGAAGTAGACAGGCTTGCAGGGAGGGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAGATGTTCTAAACCTGATCGAGTTGTTGATGAACCAATTGCTTAAATTGGACGGTATAACGGCTGATGGGGATGTGAAATTACAGAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTTGATTTGCTGAAGGTTAAGAATTCTGTGCCTAGTAGCAATGGAGACAGTGCTCCAGTGCAGCCTCAACAGAAGCATTCAAATGGGCAGAGGTTGGGAGCTGTTCAAGAGAAACAACAAAAGCATTCAAATGGACATAATAGGTTAGCCTTAGCACCAATTCAAGAACTGCAACAAGAACAACCTAGGAACTCAAATGAGAATTCTCTAGCACTTTACCAAGAGCAACAACACCAAACCTCAAGAAACTCTACCTCAGAAGTTGTAGTTACCACAAATTGGGAATTGTTTGATTCTGCCCCACCATTAATCCCTGTGCAATCCACATCCCCACCCCAACCCCCCTCAGTGACTAATAATTCAGCTCCTCCTAAGTTCAATTGGGAATTCTTCAACTAA 1092 0.4203 MMRMRNNSGNNNHKTNGLSSIMNAGGSAACRSEPGSKEWEMRPGGMLVQMRTADSDRNPVLVPTIRVRVKYGSIYHEVNISSQATFGELKKMLSGVTGLHHEDQKLFYKDKERDSKAFLDMVGVKDKSKIVLVEDPISQEKRLLEIRKNAKMEKAAKSISAISLEVDRLAGRVSAFESIISKGGKVVETDVLNLIELLMNQLLKLDGITADGDVKLQRKMQVKRVQKYVETLDLLKVKNSVPSSNGDSAPVQPQQKHSNGQRLGAVQEKQQKHSNGHNRLALAPIQELQQEQPRNSNENSLALYQEQQHQTSRNSTSEVVVTTNWELFDSAPPLIPVQSTSPPQPPSVTNNSAPPKFNWEFFN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1290 363 MobiDBLite consensus disorder prediction 1 40 - -
Pvu4g1290 363 MobiDBLite consensus disorder prediction 239 271 - -
Pvu4g1290 363 Pfam Ubiquitin family 75 133 IPR000626 GO:0005515
Pvu4g1290 363 Pfam BAG domain 159 234 IPR003103 GO:0051087
Pvu4g1290 363 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Pvu4g1290 363 SUPERFAMILY Ubiquitin-like 54 139 IPR029071 -
Pvu4g1290 363 SMART BAG_1 158 236 IPR003103 GO:0051087
Pvu4g1290 363 MobiDBLite consensus disorder prediction 239 275 - -
Pvu4g1290 363 Gene3D BAG domain 135 240 IPR036533 GO:0051087
Pvu4g1290 363 SUPERFAMILY BAG domain 118 240 IPR036533 GO:0051087
Pvu4g1290 363 ProSiteProfiles Ubiquitin domain profile. 63 133 IPR000626 GO:0005515
Pvu4g1290 363 Gene3D - 64 134 - -
Pvu4g1290 363 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 348 - -
Pvu4g1290 363 MobiDBLite consensus disorder prediction 1 26 - -
Pvu4g1290 363 CDD Ubl_AtBAG1_like 64 133 - -
Pvu4g1290 363 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 348 IPR039773 GO:0051087
Pvu4g1290 363 ProSiteProfiles BAG domain profile. 158 236 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1290 Pvu-Chr4 39193683 39196150 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1290 - - vun:114181975 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1290 4 39193683 39196150 Pvu4g1290 4 39193683 39196150 ECH