Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1283 ATGGGAGCTGGTGTTTCCAGAACTTCTGCCACAGAAAATGATGAACTTGGCACCTTTTCTTTCTCCTCCTCACAGACTACTACTACCCTTGATGATGTCCCTGAGAATTGCATCTCTTCTCTGATGATGAGTTTTGATCCACAACAGATTTGCACATTGGCAAGAGTGAACAAGGCCTTCCACAGAGCTTCTTCTGCTGACTTTGTATGGGAATCAAAGTTGCCCTCAACCTATAAATTCCTTCTCAACAAAGCACTTGGTGAACACAATCTTTGCTCCATGACCAAAAAACAGATCTATGCCAAACTATGCCGACCCAATTTCTTTGATGCTGGCACCAAAGAGTTTTGGCTGGACAGATGCAGTGCACAAGTTTGTTTGTTCATTTCTTCAAAAGCCTTCAGGATTACAGGAATAGATGACAGAAGATATTGGAATTATGTTCCAACAGATGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTAATAGGGGAGCTAGAATTTGAGTTTCCAAAGGGAGACTATAGTGTATTTTTCAAGCTTCAATTGGGGAAGCCCACCAAGAGATTGGGCCGAAGAGTGTGCAACCTTGATCAAGTTCATGGATGGGACATCAAGCCCGTCAGATTTCAACTATCTACATCCGACGGCCAGAGTTCACTCTCACAGTGCTATCTGCGTGGGCCTGGAGAATGGGCCCACTATCATGTTGGAGACTTTGCAGTTAAGAAGCCCAATGGGCTAACAAACATCAAGTTTTCTTTGGCCCAGATTGATTGCACGCACACCAAAGGTGGCCTTTGCATAGATGGGGTAGTGATTTGCCCCAAGGAGTTTTCAGAAAGACTGAAACACTTTTAG 882 0.4388 MGAGVSRTSATENDELGTFSFSSSQTTTTLDDVPENCISSLMMSFDPQQICTLARVNKAFHRASSADFVWESKLPSTYKFLLNKALGEHNLCSMTKKQIYAKLCRPNFFDAGTKEFWLDRCSAQVCLFISSKAFRITGIDDRRYWNYVPTDESRFKSVAYLQQMWWVEVIGELEFEFPKGDYSVFFKLQLGKPTKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQSSLSQCYLRGPGEWAHYHVGDFAVKKPNGLTNIKFSLAQIDCTHTKGGLCIDGVVICPKEFSERLKHF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1283 293 PANTHER F-BOX PROTEIN 1 293 - -
Pvu4g1283 293 ProSiteProfiles F-box domain profile. 27 73 IPR001810 GO:0005515
Pvu4g1283 293 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
Pvu4g1283 293 Pfam Phloem protein 2 125 283 IPR025886 -
Pvu4g1283 293 SUPERFAMILY F-box domain 25 87 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1283 Pvu-Chr4 39084855 39088202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1283 - - pvu:PHAVU_004G121100g 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1283 4 39084855 39088202 Pvu7g0682 7 5959073 5962032 ECH
Pvu4g1283 4 39084855 39088202 Pvu4g1283 4 39084855 39088202 ECH
Pvu4g1283 4 39084855 39088202 Pvu7g0682 7 5959073 5962032 PCT