Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1271 ATGCGAGTCTTCGCTTCTCGAACCTCCAACTTCTTCAAGCGCAATCTCGAGAATTTCCCATACAATTTCAACTTCTTCAGAGAATTCGCGCAATCCACCGCAATCCCCAAAAAGCAACTCCGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTGGAGAAGAAAACGCGCAAGGTCCTCAAATTTCAGAGCATCATCCTCTCCGAGCCCAGCCAATCACTCCCAATCTCGCGCCTCGAAACCCTCGCGCGCCGCTTCGGCTTCACGCGTTCCCACACGTCTTTTGAAATCTTTGAGCACCCCGTCCAGCGCATCCTCTTCTGCCGCCTCACCCGCAAGGCCATCCTCCAGATCCAGCAGGAGCGCCACGCGCTCTTGGAGCAGATACCACGCGCCGTCACGCGGCTTCGGAAGCTTCTCATGATGTCGAATGAAGGCAGGCTCCGCCTCGAGCACGTACGCATCGCACGCTCCGCTTTAGGGCTTCCCGACGACTTCGAAAACTCGGTGGTTCTGAGGTACCCTGAGTTTTTCCGTTTGATTGATGCCAATGAAACTAGGATGAAGTACATTGAGGTTGTGGAGAGAGACCCTAGGTTAGGGACTTGTGCGATTGAGGAGGCTAGGGAGAGGGAGTATAGAGAGAGAGGTGGTGATGCTGAGGATATTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATAGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGGTTCCTTATTGGTCCCCTTATGAGAATGTTTCTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGAGCTGTCGCCACCATTCATGAGTTGTTGTCGTTGACTGTTGAGAAGAAGATTACATGGGAGCGGATCGCACATTTCCGGATGGCGATGAACCTGCCCAAGAGGTTGAAGGATTTCCTGCTCCAGCACCAAGGTATTTTCTATGTCTCCACCAGAGGGAATCAGGGGAAGCTTCACACTGTTTTCCTTAGGGAGGCGTATAGGAAAGGCGAGCTGATTGAGCCGAATGAGTTGTATTTGGCACGGAGGAAGCTAGCTGAGCTTGTGCTGTTGAGTCCTCGGAAAGCCAAGGTTAATCAGGAGTTGGTTGGGTACAGGAGAAGCAGATTAGAGGACGAAATGGGGCAGGTAACGAGGACGTATGTGGAGGATGCTTGTGAAGATTTTAAGGGGGAAGATGGTAATGATCTGGATAAGGATGCAGAGGATGATGATTTGACGTCAGATATAGGTTCTGATGTTGATTTGGGAGATGAGGGTGACGATTTTGTAGATATGGGAGATGAGGGTGATGATTCTGTGGATAGTGTCTCATTACAAAGGACATCATAG 1383 0.5011 MRVFASRTSNFFKRNLENFPYNFNFFREFAQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSIILSEPSQSLPISRLETLARRFGFTRSHTSFEIFEHPVQRILFCRLTRKAILQIQQERHALLEQIPRAVTRLRKLLMMSNEGRLRLEHVRIARSALGLPDDFENSVVLRYPEFFRLIDANETRMKYIEVVERDPRLGTCAIEEAREREYRERGGDAEDIRFSFVIDFPPGFKIGKYFRIAMWKWQRVPYWSPYENVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITWERIAHFRMAMNLPKRLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVNQELVGYRRSRLEDEMGQVTRTYVEDACEDFKGEDGNDLDKDAEDDDLTSDIGSDVDLGDEGDDFVDMGDEGDDSVDSVSLQRTS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1271 460 MobiDBLite consensus disorder prediction 407 460 - -
Pvu4g1271 460 MobiDBLite consensus disorder prediction 414 449 - -
Pvu4g1271 460 Pfam Plant organelle RNA recognition domain 42 369 IPR021099 GO:0003723
Pvu4g1271 460 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 14 428 IPR040295 -
Pvu4g1271 460 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 14 428 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1271 Pvu-Chr4 38893460 38894870 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1271 - - gmx:100782167 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1271 4 38893460 38894870 Pvu4g1271 4 38893460 38894870 ECH