LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g1241	ATGCGAACTCGCTTTCTCAACAACAACTACTTCGCTCTCCCTCCACCACAAACCATTCCCTTTCTCTACCTCCCCGTCCCTCGTCTCCCTCCACAGTCGCCCTTCGACATCCACAACCTCCTCCGCTTCGATCCTCCGCTCAATCTCTCCCTCCACCTTGATCCCTTCCCTGTACACGCTGCTCTATCCGCCTTCCTCGCCGCAGTCCTCCCACACCGAATCCGCATCCACTCTCGAGATCTCACCGCTTTAAACCCCGCGGAGAGTAAAACTATTGTGCTCGGTGATAAGAACGATGTTGTTTATGAGACGATTCAATTTGAAACACCTGAGCTTGACGTGTTCTTGGAAAATGTACGTGTCGCTGAGTCGGAGAGGATGCAAATGCTGTCTCAAACTCCAGAGGAAATGCTCAAGATGCCTGAACCATCAAGGCAGTACCCTTACGAGGCTTTGGAATCAGTATTCTTGGTTAAAGATGTAATTTCGGAGTACCTGGTGGGGGAAAATGGATATCCTCTAGAAGATCATATTTCTGTTCAGCAACTGCCACGCTCTGACCAAAACGTATTTCTTATTTTGGAAGTGGATGAGGGAAGTTTGGCAATTCCCTCTGGTATTTCTTTGGTAGGAATCGTTGACTCGTATTTTGAAAATACCAGATCTCAAAATTTCGATGAGCAATGTCAATCCATAGCGGAGGGCAAGGAACTTCTGGGTTCTATGAAGCATAGCATGATGGAATTTTTCTCAGATGAATTTTTATCAAAGAAGAGCCTTGAGTTATCAGATATGTTTCCCGAAAGTGATTTTATGAATATGTTGGAAACTGAACATGTTAATGGGAGTACTGGCCTGCAGACATCACATACTAATGGTGACTTGTTAGAGAATCTTGTTACCTTCCAGGAGTTTGAGTTCCTTGATGAAGACTTAATGCAAACCTTTGATGCTTTGTACAAAACAAAAGCTTCGGATGATCTAGTAACAAATGACTGGATGTTTAAGAAAGAGTTTAACTTCAAGAGTTTTGATGAATTGATTGTTGGTAATGAGATAGCGCTAACAGATAACGCGTTTAAATCACTGCCTGTACCTGTTATCTCTGATCATAAAAGGATGATATATCTACATGACATTATTGGAGAACAAATTTCCAGCTTGAAGACCCGACCCCTCTCTGCATCTGATGGAATTTACTTAAATTGGGATCTACTTGAAGAAGATAGGTGCAACCGCAAGATTTCAAACTGGTATCAGGACATATTGGCCAAGATAGATCTGAGCAACGAGGATTTTGGAGGTAAGCCTTTCGATGATGGAAAATTGGTATTTGGTCTAGTTTTCTGTGAGGATACGACAGGTGAATGTGAAATTAAACAGGATGAAGAGTTACAGAAGTTGCTTTCTGATTGCATGCCTGTCCTTGACAATCATCCGGTGGAATTTGCTTCGGGCAAAATATTAGAACCTGTATCTTTTAAACAAGGAAGTGAAGAACAATTACCTGAAAGAATGACTGAGAGGGCTTCATTATTATTTAAATCTATGTCAGAAATCAGTAATCTTGATTATTTCTTGAACCCTCAGAAAGTTACTGGTGAGGGGAATTATAATTATGCAGTAGAGTCCACTAATGCTAATGTTAGTATTCCAAAAGCTTCATCCACTGAATTGAAAGTTGATACACAGTCTCTAGGGTCAAATACTATTCTGCATAGAGTTAAGTTGTCTGATGATATTGTGGCCCTGGCTGGATATTTTGAAAAAAGCTATCTAGCCATTTTGCAAAGAGATACAGAAATGACAAAAACAGATAAATCAAATGTAGATTATTTTCAATTGCTCAGCATTCAAAGGCACAAACTGATTGAATACCATGCAAATGGAAACAATATGGCATTTATTGTGTTATGTGCTATCAAACAGGCTGCTTGGTACTTGTGTTTCTATGGTCTCCATCCAGCATTCTTGTATTTAGACAAATTATGTCAAAACTTGGACTATTTGAAATCAAGATTAGGCATCCTCAAATCTTTGATTGAAGATGAAAAGAGGAAGGTGGACAACAATGTTACTTTGGCACACCCATCATTAAAAATTGTGAAGGAAATTTTCCTGTCATACATCAAACGGGATAGTTTGAAAACTTTGATTGTGGCTGAAGAAGTATTCTGGTCTTCATTGAAAAATCTTCTCCTTTCCGTGGGGTTATCATTCAGTGAACAAAATGCTCATAATAGAGATCATCCATATGCCAATAATGGGCGTGAGGAGGCAGATACTAAAATGCGAGAACTTATGATTTCTGACTGCTTGTTGGTTTCACACAAGCATGTTTCTTCGTTGCTTCTACTCAACAAATTTGACATTATCTTGGAATATGGAGGTTCATACGGCTCATCTAGGATATCTGAGATTTCCAAAACCTTGGTTGGACTGCCTCATCTTCACTTTTTGACCGTTGAATTTGATGATCATGCCGCTCTGAAAGCACTCTGCGAAGGTGTTGAATTGCACCCAAACACTGAGATGTTATTGGAAAGTGAGACTCGTCCTATTTTCAATCATAAAGAAAGTATGATGAATCAGAACGTGGAGAGACTACTGAATTTTTGTCCTGTGGAGCAATGCTATGATAAAATATCTTCAAAGGTTGCACCTGAAGCAGATAATATTGTGCCACTAATTCCTGCTGTGAAAATTGAGCAAGGTCATAAGAACATGGAGGCACTCCCTGGAACAGTTATCATCGTAAATACTCAAAATGTAGATAAGGAAATGATAATGTCTAGAAGAAGCTCTTACCAAGTGATTCTGGCAATGGAGAAAGAAGGAATTCAAGTCGTTGAACGTGATTTAAATTTGCCGGCTGATATTATACTAAGTTCTGCTATTTGCTTGGCATGGTATGATAGTGAAACCCTGGGGAAGAAAGCAACTCCAACAACCGAAGCATCCTCAAGCTTGCCTTTATGTATTGAGAATATTGCCACAGATGTCCTGACACTGCTTAGTTTTTACTTCCATGGTTGCTTTCTGGTCTTTGAAGGTGAATTTAACTTTCTATCAACTGTAATGGAATCCTCTGATGGACTTTATGCTGCAGCAACAAGCCTGGGAATTGATTTGCAGATATTCTTCTCTTACTCACCTGAATTGACAAATGAAGTTATTGTAAGCTGCATTAAGACCGCTACCAATACGACAAGGGGTCTGTATCCTAAAATGCCTGACTCGGTAACTCTTGCCGAGTTTTTTCTTACGGAATTCCCTGGAATAAATCCTTTAACGGCACACTCTATACTATCTTCAGGGGTCATGCTTAATGAGTTTCTTGCGTGGTCACATGAGCAAAGGATGCATGTTTTAGAAAAGTATCACGTTCCAGAAGAAAGTATTTCTCTTTTCAGTGTTTTCTGCAGATATGGGGAACGGGAGGATTCAAAATCCATAATGACAGATTGCTCCTCTTCGGTATCTTCAGGTCTGGACTCAGATAGGTCTTGTTTATATCAAGTTCAAAATGAAAGAAAAAGAAAACATTCAATAAGTAGTCATCAGATGGATGAACTGTGTTTTGATGAGTTGACTGAAATCGAGACACTAAATCCAGTAGTTGAGGCTGTCCCGGATTCCTCTACCTTGCCAAAACCTTTTGATTTTGGTGTTTCAAAAAATGCTGGGAGATCCAGTGAGTTAGCAAAGACAAGTTTATCCATGAGTGAGTTTTTTGGTCAAAAGCAGAACATCAGCGCGGCTACAATGCGAAACCGTTCCGGAGTCTCCTATTCACCAGGGAACTGCAAAGCTCCCAAAAAATTAGAGCAGCTGAGACAACCCGGTTTATCTTTGAAAAATAAAGAGTTAGCTCAAAATGAAATACTGGATACTGATTTTATTGGAAAAAGTGTGAATTGGCACAGCCTTAGTAATTCTGAGAAGTTGCATGAAGACATTAGAGGTGAGGTGGTGGACTTGACAGATAGCCCCTTATTTGATAAAAGCTTTGACATTCCTGATTCCATGTACTTCACAAATTTGATAACGGAAACAGAGAAAGATCACATGAGAAAGAATAAAATTGCAAGGAAATTGTCATTTGATAATAGTAGTCACCAAGAAACCAACTCATCGAAAATATGGAGATCCTTAAAAGATACACAAGGAGAAATAGACGAATTCCCCGAACCAGATTTTGGAGAAAATGTATTTCCTCTTGATTTCAAGTCACATGGAAACACTGGTTTAACTCAGGCATCGATGAGAAATTTAGAAGAATCAGCATTCAAGGAAGAAATGTCGCATTTGAGTGAAACTCCACTCTCATTTGCCCGCCGGTCAGCTTGTCTATTAAAGAATTCACCCTGGACAACTGAATTTATCAATAAAGTAAAAGAAAAGAGCAAATTGCGTCAAAAATCATTATTATGTGAGAATTCTGGCCCTTATTTTGGGTATCCTGGGAACATGTCCAAAGCTTTTAAGAGAAAGAGTCCTTCTGTAATTGATTTTTTTAAGTACCAACCTAGCAGATCTGGAAATGTTTCGGAACAGAAAAGACAGAAGCAATCTGGACTATCTTCAAACTCAACCAAGAAAGGAAGATATTCTACTCCCTCATCCTCATGGACTCCAAAAGATAAGCGATCAACAAAGACACTGACCTTTGGGAGGAACGGAAGTGGAGGCCAAACAAGGCTGGTCTGGAGTGATAAAAAGATAAACTCATACCAGACACAATAA	4746	0.3953	MRTRFLNNNYFALPPPQTIPFLYLPVPRLPPQSPFDIHNLLRFDPPLNLSLHLDPFPVHAALSAFLAAVLPHRIRIHSRDLTALNPAESKTIVLGDKNDVVYETIQFETPELDVFLENVRVAESERMQMLSQTPEEMLKMPEPSRQYPYEALESVFLVKDVISEYLVGENGYPLEDHISVQQLPRSDQNVFLILEVDEGSLAIPSGISLVGIVDSYFENTRSQNFDEQCQSIAEGKELLGSMKHSMMEFFSDEFLSKKSLELSDMFPESDFMNMLETEHVNGSTGLQTSHTNGDLLENLVTFQEFEFLDEDLMQTFDALYKTKASDDLVTNDWMFKKEFNFKSFDELIVGNEIALTDNAFKSLPVPVISDHKRMIYLHDIIGEQISSLKTRPLSASDGIYLNWDLLEEDRCNRKISNWYQDILAKIDLSNEDFGGKPFDDGKLVFGLVFCEDTTGECEIKQDEELQKLLSDCMPVLDNHPVEFASGKILEPVSFKQGSEEQLPERMTERASLLFKSMSEISNLDYFLNPQKVTGEGNYNYAVESTNANVSIPKASSTELKVDTQSLGSNTILHRVKLSDDIVALAGYFEKSYLAILQRDTEMTKTDKSNVDYFQLLSIQRHKLIEYHANGNNMAFIVLCAIKQAAWYLCFYGLHPAFLYLDKLCQNLDYLKSRLGILKSLIEDEKRKVDNNVTLAHPSLKIVKEIFLSYIKRDSLKTLIVAEEVFWSSLKNLLLSVGLSFSEQNAHNRDHPYANNGREEADTKMRELMISDCLLVSHKHVSSLLLLNKFDIILEYGGSYGSSRISEISKTLVGLPHLHFLTVEFDDHAALKALCEGVELHPNTEMLLESETRPIFNHKESMMNQNVERLLNFCPVEQCYDKISSKVAPEADNIVPLIPAVKIEQGHKNMEALPGTVIIVNTQNVDKEMIMSRRSSYQVILAMEKEGIQVVERDLNLPADIILSSAICLAWYDSETLGKKATPTTEASSSLPLCIENIATDVLTLLSFYFHGCFLVFEGEFNFLSTVMESSDGLYAAATSLGIDLQIFFSYSPELTNEVIVSCIKTATNTTRGLYPKMPDSVTLAEFFLTEFPGINPLTAHSILSSGVMLNEFLAWSHEQRMHVLEKYHVPEESISLFSVFCRYGEREDSKSIMTDCSSSVSSGLDSDRSCLYQVQNERKRKHSISSHQMDELCFDELTEIETLNPVVEAVPDSSTLPKPFDFGVSKNAGRSSELAKTSLSMSEFFGQKQNISAATMRNRSGVSYSPGNCKAPKKLEQLRQPGLSLKNKELAQNEILDTDFIGKSVNWHSLSNSEKLHEDIRGEVVDLTDSPLFDKSFDIPDSMYFTNLITETEKDHMRKNKIARKLSFDNSSHQETNSSKIWRSLKDTQGEIDEFPEPDFGENVFPLDFKSHGNTGLTQASMRNLEESAFKEEMSHLSETPLSFARRSACLLKNSPWTTEFINKVKEKSKLRQKSLLCENSGPYFGYPGNMSKAFKRKSPSVIDFFKYQPSRSGNVSEQKRQKQSGLSSNSTKKGRYSTPSSSWTPKDKRSTKTLTFGRNGSGGQTRLVWSDKKINSYQTQ*	1582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu4g1241	1581	MobiDBLite	consensus disorder prediction	1513	1581	-	-
	Pvu4g1241	1581	PANTHER	PROTEIN SHORTAGE IN CHIASMATA 1	1	1577	-	-
	Pvu4g1241	1581	PANTHER	PROTEIN SHORTAGE IN CHIASMATA 1	1	1577	IPR038824	GO:0007131

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g1241	-		-	gmx:102663374	2415.96

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu4g1241	4	38125490	38134464	Pvu4g1241	4	38125490	38134464	ECH