Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1240 ATGTTTAAGTCACGGGGCAAGAAAAACAATACTAAAGCTGTATTCAAACTGCAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGCCTGCACTGAAGGTAGCTTTGGTGCCAGATAATGTTGGGAAGCCTACGGTGAAACTAGAGAAAGTTGCTGTCCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCAGTAAAATTCGTCAGGGACGCAAAATCAGGAAAACTTCAAGAGAAAATCTACCATTTTCTTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAATCCTCAATTGACTTTGCCGATTTTGCTGCAGAAACTGAGCCACTGACTGTGTCCCTACCTCTGAAGTTTGCCAATTCAGGCGCAATCCTACATGTGACAATTCAGATTGTGGAAGGGGTACAAAGAGATCAAAGTACATTCAGAAATGGGGAAGACAATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCGGATGAAAATTCTCGTAATGTTTATGAAGATTTTCCCCAGCTATTACCACCCTTGAGGCAAAATTCAATGCCGTCCAAAGGAACTATCGAGGCCATTGCAATAAGAGCTCAAATACATAGGGGATCACTGGGTTCAGCGTCAGATAGGAATTTAGGCGACTCCTGGAGAAACAGCCTTGAAGATACTCGTCCTCGAGAAAGATTACAAGAGCCTTCAGATAATGTCATTGAAAACCTCAAAAGTGAAATTGTTTCTCTGAAGAGGAAAGCCGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGATAGAGAAGGAATGCAGTCGAGGACAAAGTATGTCAAGACAAATAATCAGCCTCAGAGACGAGAGAAATATCATCAAAACTAAATATGAGCAACTAATGTCGCAGCAAAACCTCATTAACGAGACCAAAAATTCAGAAGCCTTACAGACCGAGATTGAACACGCTAGGCAGCAGTTAGAAGCAATAAAAGAAGACCTTGATTATGAAAAAGAGTTTAGTTCTAATCTTAAATTGCAACTCCAGAAGACACAAAACTCAAACGCTGAACTACTTTTAGCAGTGAGAGAACTTGAAGCAATGCTGGAACATAAGAATAAGGAATTGTCGGACAATACTAAAGAGCATGATGATGCCACAGAGTTAGGTCACTTGAAGCAGAAAATTGCAGACCTGAATGGTGAAATAGACATTTATTATAAGCAACGTGAAGAGCTAAATGAGCAGATAAAAGACCTCAACTTTGAGTGTGAGTATCTGAAGAAAGAAAACCTGGATATCTCTTTGAGATTAAACCATAAAGACGCCCAACAAATTGCGTTACAAAATAAATATTCAGCTTCTTTGGCAATCATAAAAGAATTTGAATCTCAAGTACAGAGATTAGAAGAAAAGATAGGGAAGCAGGTGGATGATTTTTCAGTGTCTTTGATTTACATCAATGAACTTGAAAATCAAGTCAGTGATTTGACGAGAGAAATGAAAATAAAAGAAGAGGAATATCGAAGTCTTTCAGTTGAAATGACATTGAAAGTAGAAAAAAACGAAAAGAAGGTCATTGAAGCTTATGCAGAATGTGATGAATTGCAGAAGAAGAACAAACTCGTGGAAGAAATTATCCAGAAATGCAATCAAGAGCTAAGGCTTATTACAAATCAGAATGAATTGAAATGTCAACAGCTCTTGAACCAAATAGATTCAAAAGAAAAGAAAGTGGAAATGATGTCTAAAGAACTAGAGATTAAGTCCAAACAACTTGAAGATGTCCAAAGGCACAGGGATGAAAAGGACAAGGCATTAAGAAAGCAAATTCAATTGCTCAGAACTGAAATTAGAAAGCTGATGCCAGAAGAGCATGTATTGTCTAAAGTTGATCCAACAGAGCTGATGACTATGATGTTAATGCTAGAGAACAGTGACGAGGAGATAAGGTTTGACACCCTAATGTCAGCAGTAGAAATCTTGAAGACCGAGCACAATGAATTAAAACATAACTTGCATGTGGAACAAGCAGAGAAAGAAAATATGAAGGAAAAAATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGTAGAAGAACTAAGTGCTGTAGAAAAGAGGCTCAAAAATAGCAAAGGACCAGCAACAGCCAAAAGTATGCATTTTGCTTCATGGAACTACGAGAGTGCTGCATCTTGTTCAACCACTAAGGAGCACAATAGGAAGTCAAGATCGGAAATGCAGATGGGAATGGATGATGCAAACACCTCTGTTAGAAAGTCTGAAAAAGGAAGAACCATATGCAGTTCAGCTGAGAACAAAGTTCATCTAGCAGCACACAGAAGTGAAGTGAAAACTTGCTTGGAAAATGAGGCTATTGTCTTCAATTATGATGATGATTGTCCTACAAAAGAATTGTTGGATGAAGTGGCAGTACTAAAGGAAAGTAACAAATATATGGGAACTCAGCTAAAAGAAATGGAAGAAAGATATTCTGAGATTAGTCTTAAGTTCGCAGAGGTGGAGGGAGAAAGACAACAGCTTGTTATGGCCCTACGGAATCTGAGGAATGGTAAGAACTAG 2589 0.3862 MFKSRGKKNNTKAVFKLQFQATQVPKMKKPALKVALVPDNVGKPTVKLEKVAVQDGTCSWENPIFESVKFVRDAKSGKLQEKIYHFLVSTGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVTIQIVEGVQRDQSTFRNGEDNGNGSSRHLLSICSADENSRNVYEDFPQLLPPLRQNSMPSKGTIEAIAIRAQIHRGSLGSASDRNLGDSWRNSLEDTRPRERLQEPSDNVIENLKSEIVSLKRKAEESELELQSLQKLIEKECSRGQSMSRQIISLRDERNIIKTKYEQLMSQQNLINETKNSEALQTEIEHARQQLEAIKEDLDYEKEFSSNLKLQLQKTQNSNAELLLAVRELEAMLEHKNKELSDNTKEHDDATELGHLKQKIADLNGEIDIYYKQREELNEQIKDLNFECEYLKKENLDISLRLNHKDAQQIALQNKYSASLAIIKEFESQVQRLEEKIGKQVDDFSVSLIYINELENQVSDLTREMKIKEEEYRSLSVEMTLKVEKNEKKVIEAYAECDELQKKNKLVEEIIQKCNQELRLITNQNELKCQQLLNQIDSKEKKVEMMSKELEIKSKQLEDVQRHRDEKDKALRKQIQLLRTEIRKLMPEEHVLSKVDPTELMTMMLMLENSDEEIRFDTLMSAVEILKTEHNELKHNLHVEQAEKENMKEKISQLEGELKKKVEELSAVEKRLKNSKGPATAKSMHFASWNYESAASCSTTKEHNRKSRSEMQMGMDDANTSVRKSEKGRTICSSAENKVHLAAHRSEVKTCLENEAIVFNYDDDCPTKELLDEVAVLKESNKYMGTQLKEMEERYSEISLKFAEVEGERQQLVMALRNLRNGKN* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1240 862 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 139 IPR019448 -
Pvu4g1240 862 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 510 - -
Pvu4g1240 862 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 507 861 - -
Pvu4g1240 862 Coils Coil 567 611 - -
Pvu4g1240 862 Coils Coil 454 481 - -
Pvu4g1240 862 MobiDBLite consensus disorder prediction 210 236 - -
Pvu4g1240 862 MobiDBLite consensus disorder prediction 735 766 - -
Pvu4g1240 862 Coils Coil 661 709 - -
Pvu4g1240 862 MobiDBLite consensus disorder prediction 221 236 - -
Pvu4g1240 862 Coils Coil 489 516 - -
Pvu4g1240 862 Coils Coil 308 335 - -
Pvu4g1240 862 Coils Coil 826 846 - -
Pvu4g1240 862 Coils Coil 521 555 - -
Pvu4g1240 862 Coils Coil 350 384 - -
Pvu4g1240 862 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Pvu4g1240 862 Coils Coil 398 432 - -
Pvu4g1240 862 Coils Coil 243 277 - -
Pvu4g1240 862 PANTHER BNAC08G20130D PROTEIN 507 861 - -
Pvu4g1240 862 PANTHER BNAC08G20130D PROTEIN 1 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1240 Pvu-Chr4 38119673 38124925 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1240 - - pvu:PHAVU_004G116900g 1628.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1240 4 38119673 38124925 Pvu7g0712 7 6300161 6304280 PCT