Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1231 ATGTTTATATTTTCTGGAATTTCATCTGCCAAGTCCTCATTAAGCACCACAAGTCCCTTCACAATCCCTCTCAGGATTCAACGAGAGACTCCCTTGAACTGCAATGTATACAACAACACAGGAACATGCCCCACCAACCAAAACCCAATCCAAGAGGATGATCAGAGCCGTTCATCTGCCACGTGTCCTGACTACTTCCGCTGGATCCACGAGGACCTGAGACCGTGGGCCCACACAGGCATAACACAAGAGATGGTGGAGAAGGCAAAGGCAACAGCAAATTTCAAGCTGGTGATATTGAAGGGTAGGGCTTATTTGGAGACCTACGAAAAGGCCTTCCAAACAAGGGATGTTTTTACATTGTGGGGCATTTTGCAGTTGTTAAGGAGGTACCCTGGAAAAGTGCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTCTGCTAATCAATATAGTGGACCTGTTCCTCAGCAGCCACCACCATTGTTTAGATACTGTGGGAATGATGATACCTTGGACATTGTCTTTCCTGATTGGTCCTTCTGGGGATGGGCTGAGGTCAATATAAAGCCATGGCAAGTTTTGTTGGGAGAGTTGAAAGAAGGGAACAAGAAGATACCATGGCTCAACAGAGAGCCTTATGCATATTGGAAAGGTAATCCAGTTGTTGCAGAAACCAGAGAAGACCTCATGAAATGCAATGTTTCTGAAAATCAAGATTGGAATGCTCGTTTATATGCTCAGGATTGGGGAAGAGAATCACAACAAGGGTTTAAGCAATCAGACTTGGCAAGCCAATGCACTCATAGATATAAGCTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATATATCCTGGCATGTGACTCTACCACTCTACTTGTAAAACCACATTACTATGATTTTTTCACAAGAGGACTCGTTCCATTGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTAGATTGGGGGAACAGTAACAAGCAAAGGGCAATTCAAATTGGAAAGGCTGCAAATGACTTCATTCAAGAAGAGTTGAAGATGGATTATGTGTACGACTACATGTTTCATCTCCTAAATGAATATGCTAAACTATTTACATACAAACCCTCCATTAGTGGCAATGCTACTGAACTATGTGTGGAGTCAATGGTTTGTGAAGCAGAAGGATTGAAAAAGGCATTTATGATGGAATCATTGGTGAAGGGTCCTGCAAACACCAACCCTTGCACCATGCCTGCCCCTTTTGAGCCTCCATCTTTGTACGCAGAATTACAGAGAAAGGAAAGTTCAATTCAACAAGTTGACTCATGGGAGAGAAGTTACTGGGAGAATCAAACCATAGCATCTTAA 1395 0.4308 MFIFSGISSAKSSLSTTSPFTIPLRIQRETPLNCNVYNNTGTCPTNQNPIQEDDQSRSSATCPDYFRWIHEDLRPWAHTGITQEMVEKAKATANFKLVILKGRAYLETYEKAFQTRDVFTLWGILQLLRRYPGKVPDLELMFDCVDWPVVSANQYSGPVPQQPPPLFRYCGNDDTLDIVFPDWSFWGWAEVNIKPWQVLLGELKEGNKKIPWLNREPYAYWKGNPVVAETREDLMKCNVSENQDWNARLYAQDWGRESQQGFKQSDLASQCTHRYKLYIEGSAWSVSEKYILACDSTTLLVKPHYYDFFTRGLVPLHHYWPIKEDDKCRSIKFAVDWGNSNKQRAIQIGKAANDFIQEELKMDYVYDYMFHLLNEYAKLFTYKPSISGNATELCVESMVCEAEGLKKAFMMESLVKGPANTNPCTMPAPFEPPSLYAELQRKESSIQQVDSWERSYWENQTIAS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1231 464 SMART cap10 134 383 IPR006598 -
Pvu4g1231 464 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 18 462 - -
Pvu4g1231 464 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 18 462 - -
Pvu4g1231 464 Pfam Glycosyl transferase family 90 58 453 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1231 Pvu-Chr4 37971217 37973375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1231 - - pvu:PHAVU_004G116000g 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1231 4 37971217 37973375 Pvu4g1231 4 37971217 37973375 ECH