Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1224 ATGAATTCCTCCCTTTTCATCACTGTGTTTCTTCTTCTATGCTGGGTTTCCCTTTGTGTGTGCAGAGACACAGTGTGCATCGGAAGTGAGAGAGAGACACTGTTGAAGTTTAAGCATCATCTCAAAGATCCTTCAAACAGACTCTCTTCTTGGAATGCTACTGCCAATTCCAATTGCTGCCAATGGGATGGTGTTGTCTGCAACATCATTACATCCCACATTGCAGAGCTTCACCTCAACACTCCATTTCCTACTTTCGATGAGGATCTAGTTCCAAATCCACTTCGTACTTTCGATGAGGACCTAGTTCCAAATGCTTATAATTACGTTTATGAAGAATTATACGAAGAGTATAGTAGACAAGCGTTCGGTGGAGAGATAAATGCTTGTTTGGTTGATTTGAAGCATTTGAATTACTTGGATATCAGCGGCAATGATTTTGGAAGCAGTCCAATTCCTTCTTTCATTGCAACAATCACTTCCTTAACTCACCTCAACCTTTCTCATGCTGGATTCACAGGAAACATTCCTCCTCATTTTGAAAATCTCTCAAATTTGCTCTATCTTGACCTGAGCTCCAATGAATTTCTTGGAGAAGGTATGCCAATTCCTTCTTTTGTTGGGAGAATGAACACTTTAATTCACTTGGACCTCTCTAATTCTGGATTCATGGGCATTCCTCTTCAGATTGGGAATCTTTCCAATTTAGCCTATCTAGGCCTAAGTTTTCCTCATCTCAAGTTTTTGGACCTATCATCCAACATCTTACAGGGGATTATTCCGAATGTCCTGGAAAATGTGACTTCCTTGATTACACTTGATTTGTCATCCAATCAACTTAAAGGTCCAATTCCAACTTCTTTGGGAAATGTGTCTTCTCTGATTGCACTTGATCTATCATACAATCAACTTGAAGGTCCAATTCCAAATTCTTTGGGAAATTTGACTTCTGCTATTACACTTGATTTGTCACACAATCAACTTGAAGGTCCAATTCCAACTTCTTTGGGAAATATGACTTCTCTTATTGCACTTGATATGTCACACAATCAACTTTCGGAACTTCCAAGATCACTTGAAAAACTATCATCATTAAGAGTTCTTGTTCTATCCTCGAATCGTTTTAGTGGAAATCCATTTGAAAGTCTCATAACACTCTCTAAATTGTCACACCTTGACATTGGTGACAATTGCTTTCAAGGAGTTGTCAAGGAAGGTCATCTTGAAAATCTTACCAACTTGAGTGAATTTCATGCATCAGGAAACAATTTGACTTTAAAAGTAGGTCCCAATTGGCATCCTACTTTTCAGCTTACCTATTTGGATATGAGCTCTTGGCAATTAGGTCCCAACTTTCCATTATGGATTCAGTCACAAAACAAGAACCTTCAGTATTTAGCGATGTCAAACACAGGTATTTTAGATTTTATTCCCTCTTGGTTTTGGGAAACATTTTCTCCAATTACCCTTTTGAACCTCTCTCACAATTATATCCATGGTGAGCTTGGGACTACATTAATGAATCCAATATCTATCAATGTTGTTGATTTGAGTGCAAATAACTTATGTGGCAAATTGCCCTCTCTTTCAACTAGTGTGGTTTCATTAGATCTTTCAAGCAACTCATTCTCCAAATCCATGCATGATTTTTTATGCAGAAGTCAAGACAACCAAATGTGGTTAGAATTTCTCAATCTTGCATCAAATAATCTGTTAGGAGAAATACCCGATTGTTGGGGCATTTGGTCATATCTAGTGGATATAAATTTACAAAGCAACAATTTTGTTGGGAAATTTCCTCAATCCATGGGTTCCTTGACAAAGCTACAATCTTTATGCATCCGTAACAACTTGCTCTCAGGAACATTTCCTACAATTTTGAAGAAGATCAATAAATTGATTGTGTTGGATTTTGGAGAAAATAATTTTTCAGGAACAATTCCAACTTGGGTTGGAGAGAGACTTTTAGATATGAAGTTTCTCATCCTTCGATCAAATAAATTTTGGGGTCATATTCCTGATAAAATATGTGATATGAGACTTATTCAAGTGTTAGACCTTGCACTAAATAATTTGACTGGAAATATACCTACTTGTTTTAATAGCTTAAAGTTTAGCATATTCAGTGTTGTTCTTTGGCTAAAAGGAAGAGAAGATGAGTACAAAAGCTTTCTCGGGTTGGTAACAAGCATTGATTTGTCTAATAACAAATTAGTAGGAGAAATACCAAGTGAACTCATGGATTTATATGAATTGAGATTTTTGAACTTGTCCTATAACCAACTAAGTGGTCACATTCCAGGAAGCATTGGTAATATGAGATCATTATTGTCTATCGATTTCTCAAGGAATAAACTTTCTGGTGAAATTCCTCCAACCATTTCAAATTTGAGCTTTCTTAGTATGCTAGACTTGTCTTATAATCAATTGAAAGGGAAAATTCCAGAAGGAGTTCAATTGCAAACCTTTGATGCCTCCAACTTTATTGCCAACAATCTCTGTGGTCCACCACTACCCATAAGTTGTAGCTCCAATGTGAAAGTTCATAATTTTGATCACAATGACAAAGGAAGCGATAGGCTTGGAGTGAATTGGTTTTTTACAATTATTATCTTAGTTAATTAA 2625 0.365 MNSSLFITVFLLLCWVSLCVCRDTVCIGSERETLLKFKHHLKDPSNRLSSWNATANSNCCQWDGVVCNIITSHIAELHLNTPFPTFDEDLVPNPLRTFDEDLVPNAYNYVYEELYEEYSRQAFGGEINACLVDLKHLNYLDISGNDFGSSPIPSFIATITSLTHLNLSHAGFTGNIPPHFENLSNLLYLDLSSNEFLGEGMPIPSFVGRMNTLIHLDLSNSGFMGIPLQIGNLSNLAYLGLSFPHLKFLDLSSNILQGIIPNVLENVTSLITLDLSSNQLKGPIPTSLGNVSSLIALDLSYNQLEGPIPNSLGNLTSAITLDLSHNQLEGPIPTSLGNMTSLIALDMSHNQLSELPRSLEKLSSLRVLVLSSNRFSGNPFESLITLSKLSHLDIGDNCFQGVVKEGHLENLTNLSEFHASGNNLTLKVGPNWHPTFQLTYLDMSSWQLGPNFPLWIQSQNKNLQYLAMSNTGILDFIPSWFWETFSPITLLNLSHNYIHGELGTTLMNPISINVVDLSANNLCGKLPSLSTSVVSLDLSSNSFSKSMHDFLCRSQDNQMWLEFLNLASNNLLGEIPDCWGIWSYLVDINLQSNNFVGKFPQSMGSLTKLQSLCIRNNLLSGTFPTILKKINKLIVLDFGENNFSGTIPTWVGERLLDMKFLILRSNKFWGHIPDKICDMRLIQVLDLALNNLTGNIPTCFNSLKFSIFSVVLWLKGREDEYKSFLGLVTSIDLSNNKLVGEIPSELMDLYELRFLNLSYNQLSGHIPGSIGNMRSLLSIDFSRNKLSGEIPPTISNLSFLSMLDLSYNQLKGKIPEGVQLQTFDASNFIANNLCGPPLPISCSSNVKVHNFDHNDKGSDRLGVNWFFTIIILVN* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1224 874 PRINTS Leucine-rich repeat signature 342 355 - -
Pvu4g1224 874 PRINTS Leucine-rich repeat signature 797 810 - -
Pvu4g1224 874 SUPERFAMILY L domain-like 551 855 - -
Pvu4g1224 874 Gene3D Ribonuclease Inhibitor 201 241 IPR032675 -
Pvu4g1224 874 PANTHER LRR RECEPTOR-LIKE KINASE 294 869 - -
Pvu4g1224 874 PANTHER LRR RECEPTOR-LIKE KINASE 120 218 - -
Pvu4g1224 874 PANTHER LRR RECEPTOR-LIKE KINASE 202 295 - -
Pvu4g1224 874 SUPERFAMILY L domain-like 128 282 - -
Pvu4g1224 874 SMART LRR_typ_2 749 773 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 243 266 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 362 382 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 339 361 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 183 210 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 267 290 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 291 315 IPR003591 -
Pvu4g1224 874 SMART LRR_typ_2 797 820 IPR003591 -
Pvu4g1224 874 Gene3D Ribonuclease Inhibitor 407 707 IPR032675 -
Pvu4g1224 874 Gene3D Ribonuclease Inhibitor 708 850 IPR032675 -
Pvu4g1224 874 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pvu4g1224 874 Gene3D Ribonuclease Inhibitor 242 406 IPR032675 -
Pvu4g1224 874 ProSiteProfiles Leucine-rich repeat profile. 341 363 IPR001611 GO:0005515
Pvu4g1224 874 Pfam Leucine rich repeat 244 304 IPR001611 GO:0005515
Pvu4g1224 874 Pfam Leucine rich repeat 320 375 IPR001611 GO:0005515
Pvu4g1224 874 SUPERFAMILY RNI-like 244 553 - -
Pvu4g1224 874 Gene3D Ribonuclease Inhibitor 27 200 IPR032675 -
Pvu4g1224 874 Pfam Leucine Rich Repeat 752 772 IPR001611 GO:0005515
Pvu4g1224 874 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515
Pvu4g1224 874 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 120 218 - -
Pvu4g1224 874 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 294 869 - -
Pvu4g1224 874 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 202 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1224 Pvu-Chr4 37835572 37839980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1224 25 842 Receptor kinase-like Gene Family AT2G15080 31.360 6.23e-92 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1224 - - vra:106762523 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1224 4 37835572 37839980 Pvu4g1224 4 37835572 37839980 ECH