Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1218 AGAGAGACACTGTTGAAGTTTAAGCATCATCTCAAAGATCCTTCAAACAAACTTTCTTCTTGGAATGCTACTGCCAATTCCAATTGCTGCCAGTGGGATGGTGTTCTCTGCAACAACATTACATCCCACATTGCAGAGCTTCACCTCAACACTCCACTTCCTACTTTCCATGATTATGATTATGAAGTTTACGAAAAAGTTTACGAAGAGTATACTAGACGAGCATTCGGTGGAGAGATAAATCCTTGTTTGGTTGATTTGAAGCATTTGAATTACTTGGATTTCAGTGGCAATCTTTTTGCAAGCATTCCAATTCCTTCTTTCATTGCAACAATCACTTCCTTAACTCACCTCAACCTTTCTTATGCTGGATTCACGGGAAACATTCCTTCTCATTTTGGAAATCTCTCAAATTTGCTCTATCTTGACCTGAGCTCCAATGAATTGCTTGGAGGAGGTATGCCAATTCCTTCTTTTCTTTGGAGAATGACCACTTTAATTCACTTGGACCTCTCTTATTCTGGATTCATGGGCAACATTCCTTCTCAGATTGGGATAACTCCTTATCAAATTGGGAATCTCTCCAATTTGCTCTACCTTGAACTCGGAACTGATTTTCTGTTTACAAAAAATGTTGATTGGCTATCAAGCCTTTCAAAGCTTGAATACCTTGATTTGGAAGGAGCAAACATATCTCATTTGACTCTTCCTTCTTTAATGCATTTACATTTGTCAAGATGTACCTCCCCTCACTTTAATCAACTATCCTTTTTTAACTTCTCGTCTCTCCTTACTCTTCATCTTTTTTATATTTATTATCCTTCTTCAATTGTTTTTGTTCCAAAGTGGGTGTTTGGACAGAAGAAACTTATTTCTCTTACTTTGCCTTTTAACAACATCAAAGGTCCAATTCCTGATGGTCTTCGAAACCTCACACTCCTTAAAAATCTTGACCTCCGTCGAAATTCATTCTCATCTTCTATACCTAATTGGTTTTACGATAGTCTTCCTCATCTCAAGTTCCTGAACCTATCATTCAACTTTTTACAAGGGACTATTTCTCGTATCTTGGGAAATGTGACTTCTCTGATTACACTTGATTTGTCACATAATGAACTTGAAGGTCCAATTCCAATTTCTTTGGGAAATTTGACTTCTCTTATTGCACTTGATCTATCAAGAAATCAACTTGAAGGTCCAATTGGAGAACTTCCAAGATCACTTGAAAAACTTTCATCATTGAGAACTCTTATTTTGTCATCAAATCAGTTTAGTGGAAATCCATTTGAAAGTCTCAAATCACTCTCTAAATTGTCACACCTTGACATTGCTGATAATTATTTTCAAGGAATTGTCAAGGAAGGTCATCTTGAAAATCTTACCAACTTGAAAATTTTTTATGCATCAAGAAACAATTTAACTTTAAAAGTGAGTCCCAATTGGCATCCTACTTTTCAACTTACCGATTTGGATATGACCTCTTGGCAATTAGGTCCTAACTTTCCTTCATGGATTCAGTCACAAAACAACACCCTTAAATATATAATGATGTCTAACACAGGGATTTCAGATTTTATTCCTTCTTGGTTTTGGGTAACATTTTCTCAAGCAAATTTGCTAAACCTCTCTCAGAATCATATCCATGGTGAGATTGGGAATACTTTAACAAATTCAATATCTATCAGTACAGTTGATCTAAGTGCAAATAACTTATGTGGAAAATTGCCATCTCTTTCAAGTGGTGTGGTTGTTTTAGATCTTTCAGGCAACTCGTTCTCCAAATCCATGGATGATTTCTTATGCAAAAATCAAGACAAGCAAATGGAATTAGAATTTCTCAATCTTGAATCAAGTAATTTGTCAGGAGAAATACCCGACTGTTGGACCATTTGGCCATATTTAATGGATGTAAATTTACAAAGCAACAATTTTGTTGGAAACTTTCCCCAGTCCATGGGTTCCTTGACAGAGCTAAAGTCTTTACGCATTCGTAACAACTTACTCTCAGGGACATTTCCTACAATTTTGAAGAAGACCAATAAATTGATTTTGTTGGATCTTGGCGAAAATAAATTTTCAGGAACAATTCCAGCTTGGGTTGGAGAAAGTCTTTTAGATATGAAGGTTCTTATCCTTCGATCAAATAGATTTTTTGGTCATATTCCTGATAAGATATGTGATATGAGTCTTCTTCAAGTGTTAGACCTTGCACAAAATAATTTGACTGGAAACATACCTACTTGTTTTAAAAACTTGAAGGCCATGACAGAGATGAACAAATTCGTGGATTCTCTTATCATTTGTTCTGCTATAAACTATACAAATATATATATGGATTATAGTATAGTCGGCGTTCTTCTTTGGCTGAAAGGAAGAGGAGACGAGTACAAAAACTTTCTCGGATTGGTAACAAGCATTGATTTGTCCAATAACAATCTAACAGGAGAAATACCAAGGGAAATCACATATTTAAATGAATTGAGATTTTTGAACTTGTCCCACAACCAACTAAGTGGTCATATTCCAAGAAGCATTGGTAATATGGGATCATTATTGTCCATCGATTTCTCAAGGAATCAACTTTCTGGTAAAATCCCTTCAACCATTTCGAATTTGAGCTTTTTGAGTATGCTAGACTTGTCTTATAACCATTTGAAGGGAAAAATCCCGATAGCAAATCAATTGCAAACCTTTGATGCCTCAAACTTTATCGGCAACAATCTTTGCGGACCACCACTACCCATCAGTTGTAGCTCCAATGTGAAAATTACTAATTTTGATCTCAATGACAAAGGGAGTAATAAACATGGAGTGAATTGGTTTTTTGTGAGTATGACATTTGGATTTGTCATAGGATTTTGGATAGTAGTCGGTCCTTTGTTCATTTGTAGATCATGGCGTTATGCATATTTTAATTTCCATGATCATATGTGGTTCAAACTTCAATCTATTTTTTGA 2958 0.355 RETLLKFKHHLKDPSNKLSSWNATANSNCCQWDGVLCNNITSHIAELHLNTPLPTFHDYDYEVYEKVYEEYTRRAFGGEINPCLVDLKHLNYLDFSGNLFASIPIPSFIATITSLTHLNLSYAGFTGNIPSHFGNLSNLLYLDLSSNELLGGGMPIPSFLWRMTTLIHLDLSYSGFMGNIPSQIGITPYQIGNLSNLLYLELGTDFLFTKNVDWLSSLSKLEYLDLEGANISHLTLPSLMHLHLSRCTSPHFNQLSFFNFSSLLTLHLFYIYYPSSIVFVPKWVFGQKKLISLTLPFNNIKGPIPDGLRNLTLLKNLDLRRNSFSSSIPNWFYDSLPHLKFLNLSFNFLQGTISRILGNVTSLITLDLSHNELEGPIPISLGNLTSLIALDLSRNQLEGPIGELPRSLEKLSSLRTLILSSNQFSGNPFESLKSLSKLSHLDIADNYFQGIVKEGHLENLTNLKIFYASRNNLTLKVSPNWHPTFQLTDLDMTSWQLGPNFPSWIQSQNNTLKYIMMSNTGISDFIPSWFWVTFSQANLLNLSQNHIHGEIGNTLTNSISISTVDLSANNLCGKLPSLSSGVVVLDLSGNSFSKSMDDFLCKNQDKQMELEFLNLESSNLSGEIPDCWTIWPYLMDVNLQSNNFVGNFPQSMGSLTELKSLRIRNNLLSGTFPTILKKTNKLILLDLGENKFSGTIPAWVGESLLDMKVLILRSNRFFGHIPDKICDMSLLQVLDLAQNNLTGNIPTCFKNLKAMTEMNKFVDSLIICSAINYTNIYMDYSIVGVLLWLKGRGDEYKNFLGLVTSIDLSNNNLTGEIPREITYLNELRFLNLSHNQLSGHIPRSIGNMGSLLSIDFSRNQLSGKIPSTISNLSFLSMLDLSYNHLKGKIPIANQLQTFDASNFIGNNLCGPPLPISCSSNVKITNFDLNDKGSNKHGVNWFFVSMTFGFVIGFWIVVGPLFICRSWRYAYFNFHDHMWFKLQSIF* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1218 985 PANTHER LRR RECEPTOR-LIKE KINASE 162 979 - -
Pvu4g1218 985 PANTHER LRR RECEPTOR-LIKE KINASE 66 151 - -
Pvu4g1218 985 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 66 151 - -
Pvu4g1218 985 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 162 979 - -
Pvu4g1218 985 PRINTS Leucine-rich repeat signature 363 376 - -
Pvu4g1218 985 PRINTS Leucine-rich repeat signature 384 397 - -
Pvu4g1218 985 Pfam Leucine rich repeat 337 397 IPR001611 GO:0005515
Pvu4g1218 985 SMART LRR_typ_2 136 163 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 384 410 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 411 434 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 336 359 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 311 334 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 218 242 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 728 751 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 655 678 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 824 848 IPR003591 -
Pvu4g1218 985 SMART LRR_typ_2 87 110 IPR003591 -
Pvu4g1218 985 Gene3D Ribonuclease Inhibitor 580 925 IPR032675 -
Pvu4g1218 985 Gene3D Ribonuclease Inhibitor 207 579 IPR032675 -
Pvu4g1218 985 SUPERFAMILY RNI-like 581 890 - -
Pvu4g1218 985 SUPERFAMILY L domain-like 486 597 - -
Pvu4g1218 985 Gene3D Ribonuclease Inhibitor 1 187 IPR032675 -
Pvu4g1218 985 SUPERFAMILY RNI-like 93 490 - -
Pvu4g1218 985 Pfam Leucine Rich Repeat 827 847 IPR001611 GO:0005515
Pvu4g1218 985 Pfam Leucine Rich Repeat 731 752 IPR001611 GO:0005515
Pvu4g1218 985 Pfam Leucine rich repeat N-terminal domain 2 38 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1218 Pvu-Chr4 37681712 37684669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1218 17 968 Receptor kinase-like Gene Family AT2G15080 30.080 1.14e-85 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1218 - - vun:114180873 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0719 7 6351209 6354040 Pvu4g1218 4 37681712 37684669 PCT