Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1212 ATGCCGTGTTCTTCCTCCACTCCCACCACCACCGGCGATAACAGCAGCAACACCAGTAACAAGAATAGAGATGGTTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCAATCTTCGATTCTGGTGTAGACCCTGCTGCTGATGGATTACAGATTACCTCGGATGGAAAACCAAAAGTTCTCGATGTCATTGATTGCACAGGAAGTGGTGATATTGATATCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTTTTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTATTCACGGAAACTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTAGATGATATACATCTTAAAAGGGCCCGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAGGCAATCTGAGAGCTATGATGATAGAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATAGCGGGAAGCTTGTTAATTTTGTGCCTTTAACTAATTATAGGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCCTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTGAGTGTCGTAACTGACAGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCGCAAATAATATCGTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAACTCGGGCACTGATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGTGCACCTGGTGGTACTTCTTCAAGTATCATAGGTGTTGGTGCATATGTGTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCTTCTGATGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGGTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCCACATGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGAGGAACTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTTCGAGTGTTTGGTATCAAATAAAAATCCAACAATCTGGAAAAACTAATCCTTCATCAAGGGGAATCTACCTCAGGGAGGCTAGTGCTTGCATGCAATCTACTGAGTGGACAGTTCAAGTTAATCCAAAATTTCATGAAGATGCTGACAACTTAGAGGATTTGGTTCCATTTGAGGAGTACATTGAATTACATTCTACAGAAGAGGCAGTTGTGAAGGCCCCTGACTATCTATTGCTCACTAATAATGGTCGCACCTTCAATGTAGTGGTTGATCCTTCCAATCTTTCTGATGGTCTTCATTACTTCGAGGTCTATGGTATTGACTACAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTAAGGCTGTAACTAACCTGCCTCCACAAATTTCTTTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGAAGATACATCGAAGTGCCCCATGGTGCAACTTGGGCCGAAGCAACGATGAAAACATCAGACTTCGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGACTGCTGTAACTTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCTCAGTTCTGGTCAAGTGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGAATAAAAGTCAATCAAGATGTTATACTTGATGGTAGTGACGCACCAGTTAGGATTGACACTGAAACTCTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTACCATATCGACCAGTAGATTCTAAGATTATTGCACTTTCAACAGATCGGGACAAACTTCCTTCTGGAAAGCAGATACTGGCATTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACGTACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCGAACAAGCGCATATATTCATGTGGTGATGTCTATCCGAGTTCTTCTAATCTTCCCAAAGGAGAATATACTTTACAGTTTTATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGATGGGAAATGGTTCCTTTAAGTCCTCATCTCTAGTTCCAGGTATAAAAGAAGGATTATATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTCTCCACAGGGATCTGTATTGCTAGGGACAATTTCATATGGGAAACTATCATTTGCTGGTCAGGGAGAAAATAAAAATCCTGAAAAGCACCCTGCTTCATATACAATTTCTTATATAGTTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGACTGTTTCAGAACGCATAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGGTGAAGAGCGCTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACCATTTTGGAAGGTTTAGTTTCAAGGAGTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGTGCAGCCGATGAGGTGATTGACAGTATTGATAGGGAAGAGCTGGCAAAATTTTTTGCACTAAAAAATGATCCAGAAGAAGAAGAAGCAGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTCTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTATCAAAGGACGTAGATAAGTCCCCAACTTCGGCTGGCACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATCGCAAAGATTTGTTTGAAGAGAATTTCAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATTCTCTTAGTAACACGTGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCTGAGCTTGCCAAAAAGAAATTCTACGATCTAAAACTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCCACATATGAAAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTCTTCTAG 4008 0.4271 MPCSSSTPTTTGDNSSNTSNKNRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDVIDCTGSGDIDISKVVKADADGHIFGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQQHIKVDDIHLKRAREDIQNRLDILRRQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVNFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSVVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTGDGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVSSVWYQIKIQQSGKTNPSSRGIYLREASACMQSTEWTVQVNPKFHEDADNLEDLVPFEEYIELHSTEEAVVKAPDYLLLTNNGRTFNVVVDPSNLSDGLHYFEVYGIDYKAPWRGPLFRIPITITKPKAVTNLPPQISFSKMLFQPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWETAVTFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKIRVPYRPVDSKIIALSTDRDKLPSGKQILALTLTYKIKLEDGAQIKPHVPLLNDRIYDTKFESQFYMISDSNKRIYSCGDVYPSSSNLPKGEYTLQFYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPQGSVLLGTISYGKLSFAGQGENKNPEKHPASYTISYIVPPNKIDEDKGKGSSLSSKKTVSERINEEVRDTKIKVLASLKQETGEERLEWKELSALLKSEYPKYTPLLATILEGLVSRSNVKDKINHDEEVIGAADEVIDSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKLADLTWCILSKDVDKSPTSAGTEGAKGGLDKKQSTDDRKDLFEENFKELKKWVDVKSAKYGILLVTRERRAQRLGTALKVLCDIIQDDAELAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1212 1335 MobiDBLite consensus disorder prediction 1219 1238 - -
Pvu4g1212 1335 ProSiteProfiles Serine proteases, subtilase domain profile. 48 546 - -
Pvu4g1212 1335 Pfam Tripeptidyl peptidase II 825 1009 IPR022229 -
Pvu4g1212 1335 Pfam Subtilase family 63 526 IPR000209 GO:0006508|GO:0008236
Pvu4g1212 1335 MobiDBLite consensus disorder prediction 1 28 - -
Pvu4g1212 1335 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Pvu4g1212 1335 Gene3D - 107 173 - -
Pvu4g1212 1335 Gene3D - 559 690 - -
Pvu4g1212 1335 Gene3D Peptidase S8/S53 domain 223 557 IPR036852 GO:0004252|GO:0006508
Pvu4g1212 1335 Coils Coil 1169 1189 - -
Pvu4g1212 1335 Coils Coil 200 220 - -
Pvu4g1212 1335 Gene3D - 1068 1335 - -
Pvu4g1212 1335 PANTHER TRIPEPTIDYL PEPTIDASE II 14 1220 - -
Pvu4g1212 1335 SUPERFAMILY Subtilisin-like 43 556 IPR036852 GO:0004252|GO:0006508
Pvu4g1212 1335 PANTHER PEPTIDASE S8 14 1220 - -
Pvu4g1212 1335 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Pvu4g1212 1335 PRINTS Subtilisin serine protease family (S8) signature 295 308 IPR015500 -
Pvu4g1212 1335 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
Pvu4g1212 1335 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 43 525 IPR034051 GO:0006508|GO:0008240
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1212 Pvu-Chr4 37441356 37461707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1212 K01280 - gmx:100798235 2379.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1212 4 37441356 37461707 Pvu4g1212 4 37441356 37461707 ECH
Pvu4g1212 4 37441356 37461707 Pvu7g0731 7 6507524 6528807 PCT