Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1208 ATGTCATTCCTTTGTGGCCTTCCTCTTGTTGAGTGTGTATACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTCTTCATACTGCTGGCCATGACAGTGAGAATTGGGGCTTTGCCACAGTTGAAGAATTTGAGCCTATACCACGCCTTTGTCGCTATATTTTAGCTGTGTATGAAGATGATCTTCGCCAACCCCTTTGGGAACCTCCTGGTGGCTATGGAATTAGCCTTGATAGTTTACTTCTCAAAAAGACATACGAAGATACATATGGAAGGGCACCGCCGTATATACTGTATCTTGATCACGAGCATGAAGATATAGTTCTTGCCATCAGGGGTCTAAATTTGGCAAAGGAGAGTGATTATGCGGTTCTGTTGGACAATAGATTGGGGAAGAAAAAGTTTGATGGGGGGTATGTGCACAATGGGTTGTTGAAAGCTGCTGGTTGGGTTTTGGATGCAGAATGTGAAATTTTGAGGAATTTGGTGGAAAAGTATCCAAATTACACGCTGACTTTTGTTGGACATTCCCTTGGATCTGGTGTAGCAGCTATGCTGGCAATGGTTGTAGTGCAGAATAGTCATAGACTGGGAAATATTGATCGGAAGAGGGTCAGGTCTTATGCCATTGCACCTGCTAGGTGCATGTCACTGAATTTGGCAGTCAGATATGCAGATGTCATCAACTCTGTTGTGCTGCAGGATGACTTCTTACCAAGGACAGCCACCCCATTGGAAGATATATTTAAGTCTCTTTTCTGTTTGCCATGCCTATTGTGCATGAGGTGCATGAGGGATACATGCATTCCGGAAGAGAAAATGCTCAAAGATCCAAGAAGACTCTATGCACCCGGTCGCCTTTACCACATTGTTGAGAGGAAGCCTTTTAAAATGGGAAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCGGTAGATGGAAGGTTTGAGCATATAGTCCTTTCGTGTAATGCCACATCTGATCATGCCATCATTTGGATTGAGAAAGAAGCCCAAAGGGCTCTGGATTTGATGCTGGAGAAAGAAGAACCAATGGAAGCCCCTGCCAAGCAAAAAATGGAGCGTCAGGAAACCATGACTAGACACAATGTTGAATATAAAGCAGCACTACAAAGGGCCAAAACATTAGATGTTCCACATGCTTATACACCACCATCAGAATATGGCACTTTTGATGAAGAGGGAGATGCCAACTCAACAAGATCTCAGGGTGAGTCTTCCAATAAAAGTTATGTGGAGGAAACCTGGGATGCATTGATTGAGCGTCATTTGGACAAGGATGAGCATGGCCACACTGAGCTCAAGAAACAATCATCAAGTCCTTTTACATGA 1353 0.4427 MSFLCGLPLVECVYCLACARWAWKRCLHTAGHDSENWGFATVEEFEPIPRLCRYILAVYEDDLRQPLWEPPGGYGISLDSLLLKKTYEDTYGRAPPYILYLDHEHEDIVLAIRGLNLAKESDYAVLLDNRLGKKKFDGGYVHNGLLKAAGWVLDAECEILRNLVEKYPNYTLTFVGHSLGSGVAAMLAMVVVQNSHRLGNIDRKRVRSYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCMRCMRDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFKMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMLEKEEPMEAPAKQKMERQETMTRHNVEYKAALQRAKTLDVPHAYTPPSEYGTFDEEGDANSTRSQGESSNKSYVEETWDALIERHLDKDEHGHTELKKQSSSPFT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1208 450 MobiDBLite consensus disorder prediction 386 450 - -
Pvu4g1208 450 Gene3D alpha/beta hydrolase 39 252 IPR029058 -
Pvu4g1208 450 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 443 - -
Pvu4g1208 450 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 443 - -
Pvu4g1208 450 CDD Lipase_3 44 241 - -
Pvu4g1208 450 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Pvu4g1208 450 MobiDBLite consensus disorder prediction 422 442 - -
Pvu4g1208 450 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Pvu4g1208 450 MobiDBLite consensus disorder prediction 400 420 - -
Pvu4g1208 450 SUPERFAMILY alpha/beta-Hydrolases 41 270 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1208 Pvu-Chr4 37367936 37372678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1208 1 444 Miscellaneous Gene Families AT3G49050 70.613 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1208 - - gmx:100796283 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1208 4 37367936 37372678 Pvu4g1208 4 37367936 37372678 ECH