Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1207 ATGGCTTCTGTCTCCCTTCTTCTCGCCCTGCTCGTGTTCTTCGTAATTGGCACTTCTCTTTCAAACAGTAGGAAGGAATTAAGGAACAAGGAGAAAATTGCATTACAGATGTTAGAGCGCCCAGTTCATTATTCCAACAGTATCAACCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTGTACAAAGGTTTTTTGTCTGACAAAGAGTGTGAATACCTTATTTCTTTGGCATATGCTGAGAAAGAAAAATCCTCAGGGAATGGTGGAACTTCCCTGGAGATGGAAGATGATATACTTGCAAGGATTGAAGAAAGACTTTCAATTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCATGCAATATGGGTCGGAGGAGAATGATCAAACGTTATATTATTTTACAAACAAAACCAATCTGGAATTGAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCAGACTCTACTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCAAGGAGTAGCAGCTGGTCAAGTTGCAGTAACAGTAATAAGACTCTCCAGCCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCAGACAAGAGTAGCTTTCATTCTAGATGCCCTGTGCTTGAAGGGGACATGTGGTCTGCAATCAAATACTTCTATGCGAAACCAATTAGCAGAGGCAAGGTCTCAGCCATATTAGATGATGATGAATGCACTGATCAAGATGACAGTTGTCCTGCTTGGGCAGCCAAGGGAGAATGTCAAAGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACGTGTAGGAAAAGTTGTAATGCATGCTGA 882 0.4172 MASVSLLLALLVFFVIGTSLSNSRKELRNKEKIALQMLERPVHYSNSINPSRVVQISWQPRVFLYKGFLSDKECEYLISLAYAEKEKSSGNGGTSLEMEDDILARIEERLSIWTFLPKENSKPLQVMQYGSEENDQTLYYFTNKTNLELSGPLMATVVLYLSDSTQGGQILFPESVPRSSSWSSCSNSNKTLQPVKGNAILFFSLHPSASPDKSSFHSRCPVLEGDMWSAIKYFYAKPISRGKVSAILDDDECTDQDDSCPAWAAKGECQRNPVFMIGSPDYYGTCRKSCNAC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1207 293 Pfam 2OG-Fe(II) oxygenase superfamily 151 235 IPR044862 -
Pvu4g1207 293 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 293 IPR045054 -
Pvu4g1207 293 SMART ShkT_1 252 293 IPR003582 -
Pvu4g1207 293 SMART p4hc 60 235 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pvu4g1207 293 Gene3D q2cbj1_9rhob like domain 45 235 - -
Pvu4g1207 293 ProSiteProfiles ShKT domain profile. 253 293 IPR003582 -
Pvu4g1207 293 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 3 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1207 Pvu-Chr4 37352036 37355711 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1207 K00472 - gmx:100795761 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1207 4 37352036 37355711 Pvu4g1207 4 37352036 37355711 ECH