Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1195 ATGAGTCAGCCGGGGACAATATTGAGCCATGTTGGTCTGGGCCCTTATCGATCCGAGTCGACTCAAACCTATGTTGATCCGACTCGGCCTGGCTCAAGACCAGGTCAAGTCGAGTCGGCTAGAGCTGAAGTCGAGTCGGTCCGGCAACTGCTTGCTTCTGCATTCCTGCAATCAATATACAGAAGATACAACATAGCGAGTTTGACGCAGGAAAGAAAAATGTGGGGATTGAGTAGAAAAGGAGTTTCTGGGTTTTCATCATCTTCCACTGCACTCCAAGTTACTCAAGGGATCCATGCTACCGCTCTCACTGCAATTGTCACAGGTGCATCAAGTGGTATTGGTGCTGAAACTGCTCGTGTTCTTGCATTGCGTGGTGTGCATGTGATTATGGGAGTGATTGATATGATTGATGCAAATAATTTGAAGAAATCAATACTTAAGGAAATTCCAACAGCTAAAGTTGATGTGATGAAGTTAGATTTAAGCTCAATGGTGTCTGTTCAAAATTTTGCAACTGAGTTTAATTCAACTCGTCTTCCATTGAATATTTTGATAAACAATGCAGGGATTTGTGCAGTCCCTTTCATGCTATCCACGGATAACGTTGAACTTCAATTTGCTATAAATTATTTAGGTCATTTTCATCTAACAAATCTGTTGTTGGATAATATGAAGAAAACAACAGGAGAAAGTAAGGTAAAAGGGAGAATTGTTAACGTCTCTTCAACAGGTCATCGATTTACGTATCATGGAGGAATCCATTTTGAAAAAATTAATGATCCATTAAGGTAA 795 0.405 MSQPGTILSHVGLGPYRSESTQTYVDPTRPGSRPGQVESARAEVESVRQLLASAFLQSIYRRYNIASLTQERKMWGLSRKGVSGFSSSSTALQVTQGIHATALTAIVTGASSGIGAETARVLALRGVHVIMGVIDMIDANNLKKSILKEIPTAKVDVMKLDLSSMVSVQNFATEFNSTRLPLNILINNAGICAVPFMLSTDNVELQFAINYLGHFHLTNLLLDNMKKTTGESKVKGRIVNVSSTGHRFTYHGGIHFEKINDPLR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1195 264 MobiDBLite consensus disorder prediction 15 29 - -
Pvu4g1195 264 Gene3D - 98 263 - -
Pvu4g1195 264 MobiDBLite consensus disorder prediction 1 37 - -
Pvu4g1195 264 Pfam short chain dehydrogenase 104 248 IPR002347 -
Pvu4g1195 264 PRINTS Glucose/ribitol dehydrogenase family signature 104 121 IPR002347 -
Pvu4g1195 264 PRINTS Glucose/ribitol dehydrogenase family signature 180 191 IPR002347 -
Pvu4g1195 264 PRINTS Glucose/ribitol dehydrogenase family signature 230 246 IPR002347 -
Pvu4g1195 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 252 IPR036291 -
Pvu4g1195 264 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 75 262 - -
Pvu4g1195 264 PANTHER RETINOL DEHYDROGENASE 75 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1195 Pvu-Chr4 36997069 37002819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1195 106 256 Acyl Lipid Metabolism Gene Families AT3G55310 30.573 4.38e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1195 - K19329 pvu:PHAVU_004G112500g 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1195 4 36997069 37002819 Pvu4g1195 4 36997069 37002819 ECH