Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1184 ATGGGAAGCCGCAACAACACCACCCTGGAGACGGTGAACGCGGCCGCCACCGCCATAGTCACCGCCGAATCCAGAGTCCAACCGACCACCGTGCCGAAAAAACGTTGGGGAGGCTGCTGGAGCCAATATTGGTGTTTTGGATCTTATAAAAGCACTAAAAGCAGCAAACGAATTGGCCATGCTGTCCTTGTTCCTGAACCGGTTGCACCGACAGGTCCAGCTGCTGCTGCTGCAGCACCACCAAATCCTTCAACTGCCATTGTAATGCCATTCATTGCCCCTCCATCTTCTCCTGCATCTTTAATCCAATCTGATCCACCATCTGCTATTCAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCAGCCAGTGCTTACTCTTCTGGTGGTCCAGCATCCATGTTCACCATTGGTCCATATGCCTATGAGACCCAATTAGTTTCTCCGCCCGTATTTTCCAACTTCACAACTGAACCATCCACAGCTCCTTTTACTCCCCCACCTGAATCTGTGCATCAAACAACACCTTCATCCCCTGACGTTCCATTTGCTCAATTGTTGGCATCTTCACTGGATAGGGCTCGGAAAAGTAATGGGAATCAGAAGTTTGCATTATACAATTATGATTTTCAGCCTTACCACCAATATCCTGGAAGCCCAGGTGGCCAACTCATATCACCTGGATCAGCATTTTCAACTTCTGGCACTTCTACCCCATTTCCTGATAGACCCCCTACTCTTGAATTCCGCAAAGGGGAAACACCCAAGATCTTGGGTGTTGAACACTTCTCCACCCAAAGATGGAGTTCAAGACTAGGATCTGGATCATTGACACCAGATGGTGCTGGGCAAGGTTCAAGACTTGGCTCAGGATCCGTGACTCCTGATGGTGTTGGGCTCGCTTCGCGATTAGGTTCTGGGTGTGCGACACCTGATGGTCTGGGGCAGGAGTCCAGGTTAGGTTCTGGCTGTTTGACACCTGATGGTGTTGGGCAAATCAATGAAAACAATTTACCTGTGCAAAACCAGATTTCTAAGGAAGCAACTCTTGCTAACTCGGACAATGGACATCCAAGTAATGCAACATTGATTGATCACAGAGTTTCATTTGAATTAACAGGGGAAGATGTTGCTCGGTGTCTTGCAAATAAAACTGGGGTATTGCTTCGAAATATGTCAGGGTCCTCACAAGGTATACTGGCCAAAGACCCTGTTGACAGAGAAAGGGTGCTAAGAGACACCGATGCTAGCTGTAATGTGTGTACAGAGAAAACGGATGACAAGCCTTACAATCCTATAGGAGAAGGAGAGCAATGCTTCCATAAGCAAAATTCTGTAAATTCTTCTAAAGAATTCAATTTTGACAGCAGTAAAGGAGTTGTTTCTGGTACTGGGGGCAGTGGCTCTGAGTGGTGGACTAACAGGAGGGTTGCCGGGAGGGAAGGTAGATCAGCCAACAGTTGGGCTTTCTTCCCAATGTTACAGTCAGAAATGAACTGA 1503 0.4764 MGSRNNTTLETVNAAATAIVTAESRVQPTTVPKKRWGGCWSQYWCFGSYKSTKSSKRIGHAVLVPEPVAPTGPAAAAAAPPNPSTAIVMPFIAPPSSPASLIQSDPPSAIQSPPGLLSLSSLAASAYSSGGPASMFTIGPYAYETQLVSPPVFSNFTTEPSTAPFTPPPESVHQTTPSSPDVPFAQLLASSLDRARKSNGNQKFALYNYDFQPYHQYPGSPGGQLISPGSAFSTSGTSTPFPDRPPTLEFRKGETPKILGVEHFSTQRWSSRLGSGSLTPDGAGQGSRLGSGSVTPDGVGLASRLGSGCATPDGLGQESRLGSGCLTPDGVGQINENNLPVQNQISKEATLANSDNGHPSNATLIDHRVSFELTGEDVARCLANKTGVLLRNMSGSSQGILAKDPVDRERVLRDTDASCNVCTEKTDDKPYNPIGEGEQCFHKQNSVNSSKEFNFDSSKGVVSGTGGSGSEWWTNRRVAGREGRSANSWAFFPMLQSEMN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1184 500 MobiDBLite consensus disorder prediction 227 242 - -
Pvu4g1184 500 MobiDBLite consensus disorder prediction 227 253 - -
Pvu4g1184 500 MobiDBLite consensus disorder prediction 158 183 - -
Pvu4g1184 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 499 IPR040420 -
Pvu4g1184 500 MobiDBLite consensus disorder prediction 270 292 - -
Pvu4g1184 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 499 - -
Pvu4g1184 500 MobiDBLite consensus disorder prediction 270 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1184 Pvu-Chr4 36694827 36699715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1184 - - gmx:100806399 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1184 4 36694827 36699715 Pvu7g0747 7 6663969 6667627 ECH
Pvu4g1184 4 36694827 36699715 Pvu4g1184 4 36694827 36699715 ECH
Pvu4g1184 4 36694827 36699715 Pvu7g0747 7 6663969 6667627 PCT