Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1174 ATGGGTTCTCGATATGAGGTGGAACTGAAACTCTCATCAGCGCGCGGGTTGAAGAACGTGAACTGGCGCCACGGCGCAAACCGCCCGTACGTCGTTGTTTGGGTGGACTCCAGCAACAAGCTCTCCACGCACGTCGATCAGAACGGCGACACCGACGCCAATTGGGATCAGACGCTCGTGGTCCCGTTACCGGCGAAGCCTCTCGAAGATCAAACGCTCCACATCGATGTCGTTCACGCCGTCTCGGAGGAAGAAGACACCAAGCCGCTCATCGGCTCGGCTCGGCTCAAGCTCTCTGAGATTCTCGACGATGGCGGAATGGGCGAGCGCGTGGGCCGCACTCTCACGCTCAAGCGCCCATCGGGGAGACCCCATGGGAAGGTTGAAGTTAGCGTAACCATCAGAGAACCGCGCTATCCTCCACCCGGTGGCTACCAAGCGCCGCCTTACGGCGTGCGGGACTATTCTCCCGCTCCACAGGGCTATGGGTACCCTTCGTACGGTGCGCCGCCAAGTGGGTATCCTTACAATGCTCCACCGCAAGGTTATGGTGCGCCACCGCAGGGCTATGGTGCGCCACCTCAGGGTTATGGTGAGCCACCGCAGGGTTATGGTGCACCACCGCAGGGATATGGTGCGCAACCTCAGGGATATGGTGCGCAACCTCAGAGTGGGTACGGGTATAGTAATGCACCTCCGCAAACGGCGTCGTATGGGCAGGGGAGCGCGTACGGGTACGCGCCGAAAGAGGAGAAGAAGAAGAGTAAGTTTGGGGGTATGGGAGCGGGATTGGCTGTGGGCGCGGTTGCTGGGGTTCTAGGTGGAGTCGCGCTTGTGGAGGGTGCTGAGTATCTGGAAGATAAGATTGCTGAAGATGCCGCAGAGAAGGTTGAGGAAGATCTTGGTTACGATGGTGATGACTTCTAG 927 0.5922 MGSRYEVELKLSSARGLKNVNWRHGANRPYVVVWVDSSNKLSTHVDQNGDTDANWDQTLVVPLPAKPLEDQTLHIDVVHAVSEEEDTKPLIGSARLKLSEILDDGGMGERVGRTLTLKRPSGRPHGKVEVSVTIREPRYPPPGGYQAPPYGVRDYSPAPQGYGYPSYGAPPSGYPYNAPPQGYGAPPQGYGAPPQGYGEPPQGYGAPPQGYGAQPQGYGAQPQSGYGYSNAPPQTASYGQGSAYGYAPKEEKKKSKFGGMGAGLAVGAVAGVLGGVALVEGAEYLEDKIAEDAAEKVEEDLGYDGDDF* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1174 308 CDD C2_SRC2_like 6 130 IPR044750 GO:0006952
Pvu4g1174 308 MobiDBLite consensus disorder prediction 173 245 - -
Pvu4g1174 308 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Pvu4g1174 308 Gene3D C2 domain 4 138 IPR035892 -
Pvu4g1174 308 MobiDBLite consensus disorder prediction 216 241 - -
Pvu4g1174 308 SMART C2_3c 6 110 IPR000008 -
Pvu4g1174 308 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 136 IPR035892 -
Pvu4g1174 308 PANTHER INGRESSION PROTEIN FIC1 1 307 - -
Pvu4g1174 308 MobiDBLite consensus disorder prediction 135 156 - -
Pvu4g1174 308 Pfam C2 domain 7 105 IPR000008 -
Pvu4g1174 308 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1174 Pvu-Chr4 36495283 36496616 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1174 - - gmx:100817630 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1174 4 36495283 36496616 Pvu4g1174 4 36495283 36496616 ECH