Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1172 ATGGCTTCCCACTACGAACTTGAAGTGAATCTCGCGTCAGCGCGTGGCTTGAAAAACGTGAACTGGCGCCACGGCGCGAACCGCCCATACGCCGTCGTTTGGGTGGACGCTAAGAACAAGTGCTCCACGACCGTCGACGAGGACGGGGACACCGAAGCCACGTGGAACCAAACCCTGGTTATTCCTCTTCCTCCCGAGCCTCTTGAGGATCTCTCTCTCCACGTCGACGCGGTTCACGCCGGCTCCGAGGAGGACACCGAGCCGCTTATCGGCTCGGCTCGGCTGAAGGTTGTTGAAGTCCTTGAAGACGTTGGAGTCGGAGCGCGCGTGAGCCGCACTCTCGCACTGAAGCGCCCCTCGGGAAGACCCCAAGGGAAGGTGGACGTTAATGTCGTTATAAGAGAAACTGGTGGCTATCGTACACGGGATGCGTACTACGCGCCTCCTTTAGGTGCAAGGGATTATTCCCCTGCGTCGCATGGCTATGGCTACCCGTCTCATCAGGATAATAATAATAATTATAATTCTGCGCCCCAAACGACGTCTTATAGCTACGGGACCGCTCAAGAAGAGAAAAAGAGTAAGTTTGGAGGGATGGGGACCGGATTGGCTGTGGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTCGTAGAGGGTGCTGATTTTCTGGAGGACAAGATTGCTGATGACGTGGCAGAGAACGTTGAGGATGATCTTGGATACGATGAAGATGATTTCTAG 744 0.5578 MASHYELEVNLASARGLKNVNWRHGANRPYAVVWVDAKNKCSTTVDEDGDTEATWNQTLVIPLPPEPLEDLSLHVDAVHAGSEEDTEPLIGSARLKVVEVLEDVGVGARVSRTLALKRPSGRPQGKVDVNVVIRETGGYRTRDAYYAPPLGARDYSPASHGYGYPSHQDNNNNYNSAPQTTSYSYGTAQEEKKSKFGGMGTGLAVGAVAGVLGGVALVEGADFLEDKIADDVAENVEDDLGYDEDDF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1172 247 MobiDBLite consensus disorder prediction 163 188 - -
Pvu4g1172 247 PANTHER INGRESSION PROTEIN FIC1 1 246 - -
Pvu4g1172 247 MobiDBLite consensus disorder prediction 159 188 - -
Pvu4g1172 247 Gene3D C2 domain 1 134 IPR035892 -
Pvu4g1172 247 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 135 IPR035892 -
Pvu4g1172 247 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Pvu4g1172 247 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Pvu4g1172 247 SMART C2_3c 6 109 IPR000008 -
Pvu4g1172 247 Pfam C2 domain 6 100 IPR000008 -
Pvu4g1172 247 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1172 Pvu-Chr4 36436421 36437206 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1172 - - gmx:100805876 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1172 4 36436421 36437206 Pvu4g1172 4 36436421 36437206 ECH