Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1164 ATGACGGATGTAGTACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAACCAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTGCAGGTTTATGATGAGGATGAATGGTCATTTGGATTCTGTGATCAAGGAACCGGAGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATATCGTGAATCCATTGTTCTTGGGAAAACAAACTTTCCCTGTTTGAAGGTGAATCAAATACTAAGAGAACTCAGTAGAGAGTGGCCAGGGAGTTCATATGATCTGCTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGGTGTACCTAAACTTCCAGGTTGGGTTAATAGGTTTGCGAATGCCGGCGATACTGCTATGGAAGTGGCTGGAAACACTGCATTACGGTTCCGGCAAGCTAAAACCGAGATTGTGTCAGCAAGTAAAGTAGCATACCGGTTCCTCTTAGGTGTTACGAATAATGTTACTAACAACGTTAAGAATGGTCCAGAGTCCCCTAACAATTCAAATAGAGGAGGAGGGTCCCCAAGATTTCAAACTGCTTGGTTGAAAAATATGATCACTAATGGTGCAAAACCATCCACCAGTTCTGAAGCTGAGGATCAGAATGGAATTATGCCTCTACCGCCAAAGCGAGATGATGAGAAGGCAATGCTACATAGTTCATCTTCACACGATAGTTGA 762 0.4318 MTDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYDEDEWSFGFCDQGTGVFSCPSGKNPMYTYRESIVLGKTNFPCLKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNSNRGGGSPRFQTAWLKNMITNGAKPSTSSEAEDQNGIMPLPPKRDDEKAMLHSSSSHDS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1164 253 MobiDBLite consensus disorder prediction 182 253 - -
Pvu4g1164 253 Gene3D PPPDE domains 1 169 IPR042266 -
Pvu4g1164 253 MobiDBLite consensus disorder prediction 182 228 - -
Pvu4g1164 253 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 226 - -
Pvu4g1164 253 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Pvu4g1164 253 Pfam PPPDE putative peptidase domain 3 146 IPR008580 GO:0008233
Pvu4g1164 253 MobiDBLite consensus disorder prediction 233 253 - -
Pvu4g1164 253 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Pvu4g1164 253 PANTHER DESUMOYLATING ISOPEPTIDASE 1 226 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1164 Pvu-Chr4 36083295 36087139 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1164 - - gmx:100814440 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1164 4 36083295 36087139 Pvu4g1164 4 36083295 36087139 ECH