Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1136 ATGATGAAAATAGTACTAAAGGTGGAACTCTATGATGACAAAATCAAGAAAAAGGCCATGAAAACAGTATCTGGTATTTCGGGGGTTGAGTCAGTCTCTGTGGACATGAAGAACCAGAAAATGACCGTAACTGGGGATGTTGATTCTGTTAAAGTGGCGATTAAGCTTAAGAAATTTTGCCATGCTGACATACTTTCAGTTGGACCCGCGAAGGAGGAGAAAAAGCCAGACCCCCCGAAAGCACCTGAAAACAAAGATCAAAAGGAGGATTATGCTAAAGCTCTCAAGATGTATGAAGATTACTTTCGCCAACTTAGACAGCAACCATATCCACATTACTATTACAAAACAGTGGAAGAGAATCCAAATGGGTGTGTTATTTGCTAA 387 0.4005 MMKIVLKVELYDDKIKKKAMKTVSGISGVESVSVDMKNQKMTVTGDVDSVKVAIKLKKFCHADILSVGPAKEEKKPDPPKAPENKDQKEDYAKALKMYEDYFRQLRQQPYPHYYYKTVEENPNGCVIC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1136 128 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 128 - -
Pvu4g1136 128 CDD HMA 21 55 IPR006121 GO:0046872
Pvu4g1136 128 MobiDBLite consensus disorder prediction 69 89 - -
Pvu4g1136 128 Gene3D - 1 73 - -
Pvu4g1136 128 Pfam Heavy-metal-associated domain 7 53 IPR006121 GO:0046872
Pvu4g1136 128 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 128 - -
Pvu4g1136 128 SUPERFAMILY HMA, heavy metal-associated domain 1 52 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1136 Pvu-Chr4 34866518 34867929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1136 - - vun:114180851 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1136 4 34866518 34867929 Pvu4g1136 4 34866518 34867929 ECH
Pvu4g1136 4 34866518 34867929 Pvu7g0767 7 6868859 6869653 PCT
Pvu7g0766 7 6859189 6860509 Pvu4g1136 4 34866518 34867929 PCT