Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1133 ATGAGAGAATATCAGTTCCCATGCTGTGAGCTTGACTTTTGGCTTCTTTTAATGCTATGTCTATTGCTGGTGTCACTGGCAGGCCTTGCATCAGGCCTAGCTCTAGGACTGCTGTCCTTCAGCCAAGTTGATCTTGAAGTCATCAGTAAGTCTGGTCTTCCAAAAGACAGAAAGCATGCAGAAAGGATTCGACCTTTGGTAAAGAATGGTCATTTTGTCCTGTGTACCCTTCTTCTAGGAAAATCACTGGCTATAGAGGCACTGCCAATTTTTATGGACACAATCATCCCTTCTTGGTTTACCATTCTCATGTCGGCACCCTTGGTGACTGTGTTTGCAGAGATTTTACCTCAAGCTGTATGCTCTCGATATGGACTAACTTTAGGAGCAAAAATGGCTCCCATTGTTCAACTGCTTCTGCTGATCTTCTTCCCTATAACCTACCCTGCTAGTAAGGTGCTGGATTGGGCTCTAGGGAAAGAACAATCAGTTCTTCTCAGAAGGTCAGAGTTGAAGACATTTGTGCACTTACATGCAAATGAGGCAGGGAAAGGTGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGTGCTATAGATTTGACTCAGAAGACAGCTAAAGATGCAATGACACCCATATCTCAAACTTTTTCTCTAGATATAAATTCTAAACTTGACATGCATACAATGACACAAATAATGAGCAAAGGTCACAGTCGAATACCTATCCATTCTGGACACCGAAGAAGTGTCATTGGCGTCATATTGGTTAAAAACTTGATATTCTGCCGCCCTGAAGATGAGACCCCCATAAAGAATTTGATTATTAGGAAAATTCCAAGGGTTTATGAAAGTTGGCCTCTATATGAGATATTGAATCAATTCCAGAAGGGTCACAGTCATATGGCTATGGTCTTGAAATCCAACAATGACAGAGAGATCCCTACAGCTCATGCTATGGGCGCACCCACCTTTTTTAATGCAATTACTCATAAAATATCAAATCCGGCTCAAGTTGTTGGAGAATCTGATTCTTCCTTTGTCCTTGACATGAGTCAGAGAAGTTCTGTACATGAATCCTGTTTAAACTCCAGTGATGCAGAATTTCATAGTCCAACATTAAGAAATGTCATGGAACTAGACAGTGAAGCGAGTCAAGAAAATGAATATTTCTCACAAGAACAAACAGATTCTCTTCCAGATGTCATAGACGACGAGGTTATTGGCATCATCACAATGGAAGATGTCATGGAGGAACTGTTACAGGGAGACATATTGGATGAAACTGATGAATATGTTCACGTTCAACAGAACATTAGAATTAATCTGTTGCAGTCACTTAAGTCACAATCAAGATCATCATGGAGGACTTCTGGTTCTGGTCATCGATAA 1395 0.4065 MREYQFPCCELDFWLLLMLCLLLVSLAGLASGLALGLLSFSQVDLEVISKSGLPKDRKHAERIRPLVKNGHFVLCTLLLGKSLAIEALPIFMDTIIPSWFTILMSAPLVTVFAEILPQAVCSRYGLTLGAKMAPIVQLLLLIFFPITYPASKVLDWALGKEQSVLLRRSELKTFVHLHANEAGKGGELSHHETSIITGAIDLTQKTAKDAMTPISQTFSLDINSKLDMHTMTQIMSKGHSRIPIHSGHRRSVIGVILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEILNQFQKGHSHMAMVLKSNNDREIPTAHAMGAPTFFNAITHKISNPAQVVGESDSSFVLDMSQRSSVHESCLNSSDAEFHSPTLRNVMELDSEASQENEYFSQEQTDSLPDVIDDEVIGIITMEDVMEELLQGDILDETDEYVHVQQNIRINLLQSLKSQSRSSWRTSGSGHR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1133 464 CDD CBS_pair_CorC_HlyC_assoc 206 307 IPR044751 -
Pvu4g1133 464 Gene3D - 344 429 IPR046342 -
Pvu4g1133 464 SUPERFAMILY CBS-domain pair 195 311 IPR046342 -
Pvu4g1133 464 Gene3D - 192 330 IPR046342 -
Pvu4g1133 464 Pfam Cyclin M transmembrane N-terminal domain 19 189 IPR002550 -
Pvu4g1133 464 PANTHER CBS DOMAIN PROTEIN 1 460 - -
Pvu4g1133 464 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Pvu4g1133 464 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 460 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1133 Pvu-Chr4 34753790 34757273 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1133 K16302 - gmx:100791387 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1133 4 34753790 34757273 Pvu4g1133 4 34753790 34757273 ECH