Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1081 ATGGCTCAGGTCGCCGTCTCACGATCCATTCAAAGCACTCTTTTGTGCCCCTCTTCTGGATCTGCACGTGACAGGGCCCAAAACCTGTTAAAGCCTCCATCTTTTTCTTCCACGGTGTTACCTTCCAAAGGGAACAATAACAAACGCTCCCAACATGGCCTCAGAAGCTTTCAGATCAGTGCAAGGAAATCTGCCCCTTCTGAAGTCATCCCCGTGTCACCTGAAGATGATCCAAAGATTGAGCAGCATTTGCAACATTTACGTGGAGTGCAGCCATTTGGGGAGAGTTCGGTTGGGATGTGGTCGAAGCCCACGTTTAGGCGCAAGACAAAGATCGTGTGTACCATTGGACCTTCTACCCATACGAAGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAACGTTGCTCGGTTGAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTCATTGACTTGGTTAAGGAATATAATGTTCAAAACGAGGACAATGTGATTGCAATCATGCTTGACACAAAGGGTCCTGAAGTTAGAAGTGGGGATTTGCCACAACCTATTATATTAATGCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAATGGGGGATATGCTTCTTGTTGATGGTGGTATGATGTCTATGGTGGTTAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTATTGATGGAGGAGAGCTCAAGTCTAGGCGACATTTGAATGTTAGAGGAAAAAGTGCTACACTGCCTTCAATCACCGAGAAGGATTGGGATGATATCAAGTTTGGAGTTGATAACAAAGTTGACTTCTATGCCGTTTCCTTTGTTAAGGATGCTGAAGTTGTTCATGAACTGAAGAATTATTTGAAGAGCAGTGGTGTTGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCTATACCAAATTTGCACTCAATTATCACTGCATCTGATGGGGCCATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGTCGCAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTAGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTGTCAGATATAGCAATTGCTGTTCGAGAAGGTTCGGATGGAATAATGTTGTCTGGAGAAACAGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCATACAGTAGCATTGCGGACAGAAGCCACAATACCGGGTGGTCTAATGGAACCAAACATTGGTCCAGTGTTCAAGAACCACATGAGTGAGATGTTTGCCTACCATGCAACAATGATGTCTAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGAACGGGTTTCATGGCTATCTTATTGAGCCACTATCGTCCTTCTGGCACCATATTTGCTTTTACTGATGAGAAGAGGGTGCAGCAGAGGCTTGCTTTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGACGATTCTGAAGCAACCTTCAGAAGAGCCTTGGACCTTCTGCAGAACCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACGCACAATATCCAGGTTAGGAAAGTGTAA 1734 0.4423 MAQVAVSRSIQSTLLCPSSGSARDRAQNLLKPPSFSSTVLPSKGNNNKRSQHGLRSFQISARKSAPSEVIPVSPEDDPKIEQHLQHLRGVQPFGESSVGMWSKPTFRRKTKIVCTIGPSTHTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNVQNEDNVIAIMLDTKGPEVRSGDLPQPIILMPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEMGDMLLVDGGMMSMVVKSKTEDSVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSSGVDIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGLMEPNIGPVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLQNQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1081 577 PANTHER PYRUVATE KINASE 32 577 - -
Pvu4g1081 577 Pfam Pyruvate kinase, alpha/beta domain 465 557 IPR015795 -
Pvu4g1081 577 SUPERFAMILY PK C-terminal domain-like 426 577 IPR036918 -
Pvu4g1081 577 Pfam Pyruvate kinase, barrel domain 108 442 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 Gene3D - 450 577 IPR036918 -
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 290 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 Coils Coil 575 577 - -
Pvu4g1081 577 MobiDBLite consensus disorder prediction 15 53 - -
Pvu4g1081 577 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Pvu4g1081 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 86 442 IPR015813 GO:0003824
Pvu4g1081 577 Gene3D - 178 271 IPR015806 GO:0004743|GO:0006096
Pvu4g1081 577 TIGRFAM pyruv_kin: pyruvate kinase 108 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pvu4g1081 577 SUPERFAMILY PK beta-barrel domain-like 177 268 IPR011037 -
Pvu4g1081 577 Gene3D - 110 435 IPR040442 -
Pvu4g1081 577 PANTHER PYRUVATE KINASE 32 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1081 Pvu-Chr4 30140220 30146311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1081 K00873 - gmx:100803036 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1081 4 30140220 30146311 Pvu4g1081 4 30140220 30146311 ECH
Pvu4g1081 4 30140220 30146311 Pvu7g0800 7 7262364 7268257 PCT