Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1067 ATGAGTTATTGTGTTCTCCAAACATTTTGTGTTCTTCTGCTGCTTTCTTTGCTTACCTCAGGAATTTCAGTGACATTCAACAACTCAAGTAAAAGTAGTGAACTCAAGTGCATAGAGAGGGAGAGGCAAGCACTCCTCAACTTCAAACAAGGCCTCATTGATGAGTTTGGCATGCTGTCAACTTGGACCAACCATCACAACAATACAGATTGCTGCAAATGGAAACACATTCACTGCAACAATGAAACTGGTCATGTACAACTGCTTGATCTTCATGGAAACGGTTACCATGCACAGTATTTGAGAGGTAATTTTAGTTTCATCTCCAAATTGCAAGAGCTTCGTCTACAAAACAACAGTCTTATAGATGGAAGTTTCAATGTTTCATCTACTTCCACCATGAATTCTTTGTCCTCTCTTCTCCACCTTGTTCTCTCCGATAACTTGTTAAGATCATGTTCTGTATTTCACTGGCTTTCAAATTTCACTACCAATCTTCGTACCCTTCGCCTTGATTATAATTTCTTGGAAGGTCCCATTCCAGATGAATTTGGGAAAGCGATGAACTCTCTTCAATATCTTTATCTCTCGGATAACAGACTACAAGGCAATGTTCCGTCTTTCTTTGGAAGCATGTGCAAATTACAGAGATTAGACCTCTCAAATAACAAGTTTAACGGCGAATTTCCGAACTTCCTTCAAAATTCTTCATGGTGCAGCAGACATATATTTTGGGGATTGGGGCTATCTTATAACCAAATTACTGGAAATTCTTTAAAGGGTGATGCCACTGAATCTCATCTTTCTAATTTTTCTAAATTATATCACTTATCTTTGTCACTCAACTCGTTGTCTCTAAAATTTGACAGTAGTTGGGTTCCTCCTTTTCAATTAAGTTACTTGCATCTTGCATCTTGCCAACTAGGACCGAGTTTTCCTAGTTGGCTCCAGACTCAAAGTTCGTTAATCTTTCTGGATATATCTGATGGTGGCATTAATGATTCCGTGCCAGAATGGTTTTGGAACAAGTTGCAGAATATATACATGTTGAATATGGCTCACAATAATCTCATTGGTTCAATTCCTAATATGCAATTGAAGCTTTCCTACAGACCATCTATAAATTTAAATTCAAATAACTTTGAGGGAAAAGTTCCATTATTTTTGCTACAAGCTTCCGAACTGTTACTCTCTTCAAATAACTTTTCAGATTTATTTTCATTCTTATGTGGAAACGTCACAGCTGCAAACTTGGCCACTCTAGATTTATCAGATAATCAAATAAAGGGGAAACTTCCAGATTGTTGGAAATCTGTAGACCGATTATTGTTTCTTGATTTAACCAGCAATCAATTCTCCGGAAAGATTCCTATCTCCATAGGAACCCTTATGAAATTGGAAGCTTTGGTTTTACGAAACAATAGTTTAATGGGTGAATTGCCTTCCTCTTTGAAGAATTGCAACAATCTAATTATGATGGATGTGAGCGAGAATATGTTGTCTGGTTCAATACCATCATGGGTTGGAGAAAGCATGGAGCAATTGATAATCTTGATCATTCGAGGGAATCACTTCTCTGGAAATCTTCCCCTTCATCTATGTTATTTGAAGCGTGTTCAATTGTTTGATCTTTCAAGGAATAACTTATCAGGAAGAATTCCAACTTGCTTAAACAATTTTACTGCATTGTCTCAAAACAGCATCAACAGAACTGAAACTGAGAGTCGTGTGCATTGGTACAATAGAACTTACTTTGAAATTTACAGTATTTCTGGTTATAGTTATTATACACTTCATATAACATGGATGTGGAAAGGAGTGGAACGGAGCTTCACAAATCCCGAATTGATTCTTCATAGCATTGATCTCTCGTGTAACAATTTAACAGGTAAAATGCCAAAAGCTATTACATATATGTTGGGGTTAGTTTCTTTGAATTTATCAAGAAACAATTTGAGTGGAGAAATTCCTTCCGAGATTGGAAATTTACGTTCACTTGAATCCCTTGACATATCAAGAAATCAATTCTATGGGAGAATTCCTTCTTCTATTTCTCAAATGGATTTTCTCCAAAATTTAGACTTGTCACAAAACTCACTTTCTGGAAGAATCCCATTGGGAAGACACTTGGATACATTTGATGCCTCTAGTTTTGAAGGAAATATTGATCTTTGTGGTAAACAACTTAACAAGAGTTGTTTTGGAGATCAGATATCAGTAAAGACTCAAGAAGCAGCAGTCCATGGAGAAGATTCTGTTTTCTATGAAGCATTATACATGAGCTTGGGTCTAGGATTCTTCACAGGTTTTTTGGGCGTATTTGGGCCATTACTACTTTGGCAACCGTGGAGAATTGCTTACATGATATTCTTGAACAGACTGATAGACTATCTACTTGTAATGGTTGAACTGAACATAGCAAAGTGCCAAAGTTGGCTCAAAGACTAG 2448 0.3672 MSYCVLQTFCVLLLLSLLTSGISVTFNNSSKSSELKCIERERQALLNFKQGLIDEFGMLSTWTNHHNNTDCCKWKHIHCNNETGHVQLLDLHGNGYHAQYLRGNFSFISKLQELRLQNNSLIDGSFNVSSTSTMNSLSSLLHLVLSDNLLRSCSVFHWLSNFTTNLRTLRLDYNFLEGPIPDEFGKAMNSLQYLYLSDNRLQGNVPSFFGSMCKLQRLDLSNNKFNGEFPNFLQNSSWCSRHIFWGLGLSYNQITGNSLKGDATESHLSNFSKLYHLSLSLNSLSLKFDSSWVPPFQLSYLHLASCQLGPSFPSWLQTQSSLIFLDISDGGINDSVPEWFWNKLQNIYMLNMAHNNLIGSIPNMQLKLSYRPSINLNSNNFEGKVPLFLLQASELLLSSNNFSDLFSFLCGNVTAANLATLDLSDNQIKGKLPDCWKSVDRLLFLDLTSNQFSGKIPISIGTLMKLEALVLRNNSLMGELPSSLKNCNNLIMMDVSENMLSGSIPSWVGESMEQLIILIIRGNHFSGNLPLHLCYLKRVQLFDLSRNNLSGRIPTCLNNFTALSQNSINRTETESRVHWYNRTYFEIYSISGYSYYTLHITWMWKGVERSFTNPELILHSIDLSCNNLTGKMPKAITYMLGLVSLNLSRNNLSGEIPSEIGNLRSLESLDISRNQFYGRIPSSISQMDFLQNLDLSQNSLSGRIPLGRHLDTFDASSFEGNIDLCGKQLNKSCFGDQISVKTQEAAVHGEDSVFYEALYMSLGLGFFTGFLGVFGPLLLWQPWRIAYMIFLNRLIDYLLVMVELNIAKCQSWLKD* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1067 815 SUPERFAMILY L domain-like 394 727 - -
Pvu4g1067 815 PANTHER OS10G0469600 PROTEIN 33 117 - -
Pvu4g1067 815 PANTHER OS10G0469600 PROTEIN 106 800 - -
Pvu4g1067 815 SUPERFAMILY L domain-like 37 388 - -
Pvu4g1067 815 Pfam Leucine rich repeat 618 676 IPR001611 GO:0005515
Pvu4g1067 815 Pfam Leucine rich repeat 164 225 IPR001611 GO:0005515
Pvu4g1067 815 Gene3D Ribonuclease Inhibitor 246 735 IPR032675 -
Pvu4g1067 815 SMART LRR_typ_2 663 687 IPR003591 -
Pvu4g1067 815 SMART LRR_typ_2 137 158 IPR003591 -
Pvu4g1067 815 SMART LRR_typ_2 639 662 IPR003591 -
Pvu4g1067 815 SMART LRR_typ_2 188 211 IPR003591 -
Pvu4g1067 815 SMART LRR_typ_2 212 240 IPR003591 -
Pvu4g1067 815 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 106 800 - -
Pvu4g1067 815 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 117 - -
Pvu4g1067 815 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Pvu4g1067 815 Gene3D Ribonuclease Inhibitor 33 137 IPR032675 -
Pvu4g1067 815 Gene3D Ribonuclease Inhibitor 151 243 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1067 Pvu-Chr4 29411476 29414389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1067 37 795 Miscellaneous Gene Families AT1G74180 27.064 9.42e-76 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1067 - - pvu:PHAVU_004G100300g 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1067 4 29411476 29414389 Pvu4g1067 4 29411476 29414389 ECH