Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1066 ATGCTGTCAACATGGAGGGATGATGACAGCAACATAGATTGCTGCAAATGGAGAGGCATTCAATGCAACAATGAAACAGGTGAAGTACGAATTCTTGATCTTCGTGGTTCCAAAGTGCATTTTTTGACAGGTTCAATCAATCTTACTTCATTGATTGACTTAAAAAACATGGAATATTTGGATCTAAGCAATAATGATGATTCTGGTAGAACCCAGCTCCCTCAGCACATGGGCTCTTTCAAAAATTTAAGATATCTCAATCTATCAAATGTGAATTTTTATGGAGAAATTCCTTATCAACTGGGAAATCTGTCAAAGTTGGAGTATCTTGATCTTAAAGGAAATTCTCTCAGTGGAGCAATCCCTTCTCCACTAGGGAAACTTACAAGTTTACGATATCTAGATCTAAGTGTCAATTATTATCTCCAAGGAGAAATCCCTTATCATCTCGGAAATCTCTCGCATTTGAAGTATCTTAATCTTGGGACATTACTGTCTGGAGCAATCACTTTCAAGGTTGGAAATCTTCCTCTCTTGCATACTCTCAGACTTGGTGGCAATTTTGATCTAACAATTAATGGTGCAAAATGGTTATCTTCTCTCTCTTTTTTAACAACTCTTGGTCTCGATTCATTGACTAATCTTGCTTACTCTCATCACTGGCTACAAATAATTAGTGAGCTTATTCCAAACTTGAGAGAGTTGAGTCTAGTCCGTTGTAGTCTTTCAGATAAGGATGTTTCATCTTTGTTTCCTTCTCATTCCAACCTTTCCACTTCTCTTTCCATCCTTGATCTCTCTGATAATGTGTTTACATCATCAACATTTCAATTGTTGGTCAACCATAGCCATAACCTCCAAGAACTTCATTTTCGTGGGAATAACATTGTTTTGTCGTCTCCTCATTATCCATACTTTCCTTCTCTTGTTGTTCTTGATCTCGCTCTCAATAACCTGACATCATCAACGATTCTAGGAAATTTCAATTTCAGCTCCACACTACGAGAACTTTATCTAGAAGAGTGCAGTCTTACTGATACAAATTTTCTTGTTCCATCTGCTTTCATAGGAAAGTCTTCAACTTCTCTTGTCACCCTTGATCTCTCCTTTAATCTATTGAAATCATCAACTGTATTTCATTTGATTTCCAACTTCACCACCAATCTTCATACACTTTCCCTTGGAGGTAACTTGTTAGAAGGTCCCATCCCAGATGGATTCGGTATCGTAATGAACTCTCTTGAAGTTCTTTCCCTTTCATCCAACAAACTGCATGGTCAGATCCCAGCTTCTCTTGGAAATATACGCACACTACAGGAATTACTCCTTAGCAGTCACAACTTGAGTGGGAAAATTTCTAGCCTCATTAAAAACTCTTCAATGTTGTCATCTATAAGGATATTAGATCTTTCTAATAATAGGTTCACGGGAGAAATACCAAAAAGTATTGGGCTGCTGTATGAGTTGGAGACTCTTCACCTGCAGGAGAATAACTTGGAGGGTGATATCTATGAATTGCATTTCAAAAATTTGTCTAAATTGATCGATTTAGACTTAACACACAACTCATTGTCGCTAAAGTTGGATACAACTTGGATTCCACCTTTCCAATTATTTTATTTGGGACTAGCTTCTTGCAAGTTGGGTCCTAGTTTTCCAAGTTGGCTCCAGACTCAAAGTCGCTTAAGCTTTCTAGATATTTCTGATGCTGAGATTAATGACTATGTACCAGATTGGTTTTGGAACAAGTTACAATATGTAAGTGATTTGAACATGTCTCACAACAGTATCAAAGGTACAATCCCAAATTTACCAATCAAGCTTACCAAGGCAGATACACATACAGTGATTCTAAATTCAAATCAACTTGATGGGGGAGTTCCTACATTTTTGTCACAAGTTGGAACCTTGGATCTTTCCCATAACATGATTTCAGATTTGGATATATTTGTTTGTGGAAAAGGAGCAACCGCAAAAATCAGCATACTGGATTTATCAAATAATCAAATAACAGGACAATTGCCCGACTGTTGGGAACATCTAAGTTCACTGGCATTTCTTGATCTAAGCAATAATAATTTGTCTGGGAAGATTCCAAAGTCCATGGGTGCTCTTGTTCATTTGGGATTTTTACTCTTGAGAAACAACAGTTTAACAGCAGAGCTACCACTCACATTGAAAAACCACCCTCAGTTAGAGACATTAGACTTGAGCGAAAATTTGATTCCTGGTCTAATACCTTCATGGATTGGAGATAGTTTACAACAATTGAAAATCTTGAGCTTGCGGTCAAATCTCTTCTTTGGAAGTGTTCCTGTACATCTCTGTCAGTTGAGTCAAATTCTTGTCTTGGATCTTTCAAGGAATAACTTGTCAAAAGGAATTCCAACATGCTTGAGTAATTTTACTGCAATGATGGATAAAACAGTTGTAAAACAAGATGAAATCATACGAGGTTCTTATGATTCTAATGTGTTATTGACGTGGAAAGGTCAGGAATACGTGTTTCTGAATCCCGAGTATCTTTTAAAGAGCATTGATCTCCCGAGTAATGATTTTACAGGTGAAATACCAAAAGAGGTTACAAAGTTACTTGGATTGGTTTCTTTGAATATATCAAGAAATAACCTAGATGGAGAAATTCCTTCTGATATTGGGAATTTAAATTCACTAGAATTTCTTGACTTATCAAGAAATCATCTCTTCGGAAGAATTCCTTCTTCTCTCGCCAAAATTGATCGTCTTGCTGTGTTGAATTTATCGAACAATGATCTGAATGGAACAATCCCTTGGGGAAGACAGTTGCAAACCTTTGATGCCTCTAGCTTTGAAGGAAATCTTGGTCTTTGTGGTGAGCAACTAAACAAAAGTTGCCCTGGAGACAATGCAACAGGAATGCCTCTAGGAACAGAAGTTGATAATGAAGATGAAAATTCAGTTTTCTATGGAGCATTATACATGAGCTTGGGGCTAGGATTCTTCACAGGCTTTTGGGGCTTATTAGGGACAATACTTCTTTGGCAACCATGGAGAATTGCTTATATGAGAGTCTTAAACATGCTGACAGAACATATACTTGTAGTGGTTGAATTGAATGTAGCCAAGTGCAATAGGTGGCTCAAAGGATAA 3129 0.3723 MLSTWRDDDSNIDCCKWRGIQCNNETGEVRILDLRGSKVHFLTGSINLTSLIDLKNMEYLDLSNNDDSGRTQLPQHMGSFKNLRYLNLSNVNFYGEIPYQLGNLSKLEYLDLKGNSLSGAIPSPLGKLTSLRYLDLSVNYYLQGEIPYHLGNLSHLKYLNLGTLLSGAITFKVGNLPLLHTLRLGGNFDLTINGAKWLSSLSFLTTLGLDSLTNLAYSHHWLQIISELIPNLRELSLVRCSLSDKDVSSLFPSHSNLSTSLSILDLSDNVFTSSTFQLLVNHSHNLQELHFRGNNIVLSSPHYPYFPSLVVLDLALNNLTSSTILGNFNFSSTLRELYLEECSLTDTNFLVPSAFIGKSSTSLVTLDLSFNLLKSSTVFHLISNFTTNLHTLSLGGNLLEGPIPDGFGIVMNSLEVLSLSSNKLHGQIPASLGNIRTLQELLLSSHNLSGKISSLIKNSSMLSSIRILDLSNNRFTGEIPKSIGLLYELETLHLQENNLEGDIYELHFKNLSKLIDLDLTHNSLSLKLDTTWIPPFQLFYLGLASCKLGPSFPSWLQTQSRLSFLDISDAEINDYVPDWFWNKLQYVSDLNMSHNSIKGTIPNLPIKLTKADTHTVILNSNQLDGGVPTFLSQVGTLDLSHNMISDLDIFVCGKGATAKISILDLSNNQITGQLPDCWEHLSSLAFLDLSNNNLSGKIPKSMGALVHLGFLLLRNNSLTAELPLTLKNHPQLETLDLSENLIPGLIPSWIGDSLQQLKILSLRSNLFFGSVPVHLCQLSQILVLDLSRNNLSKGIPTCLSNFTAMMDKTVVKQDEIIRGSYDSNVLLTWKGQEYVFLNPEYLLKSIDLPSNDFTGEIPKEVTKLLGLVSLNISRNNLDGEIPSDIGNLNSLEFLDLSRNHLFGRIPSSLAKIDRLAVLNLSNNDLNGTIPWGRQLQTFDASSFEGNLGLCGEQLNKSCPGDNATGMPLGTEVDNEDENSVFYGALYMSLGLGFFTGFWGLLGTILLWQPWRIAYMRVLNMLTEHILVVVELNVAKCNRWLKG* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1066 1042 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 126 260 - -
Pvu4g1066 1042 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 333 1027 - -
Pvu4g1066 1042 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 89 - -
Pvu4g1066 1042 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 86 148 - -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 462 532 IPR032675 -
Pvu4g1066 1042 PANTHER OS10G0469600 PROTEIN 86 148 - -
Pvu4g1066 1042 PANTHER OS10G0469600 PROTEIN 333 1027 - -
Pvu4g1066 1042 PANTHER OS10G0469600 PROTEIN 126 260 - -
Pvu4g1066 1042 PANTHER OS10G0469600 PROTEIN 1 89 - -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 302 461 IPR032675 -
Pvu4g1066 1042 SUPERFAMILY L domain-like 614 944 - -
Pvu4g1066 1042 SUPERFAMILY L domain-like 457 607 - -
Pvu4g1066 1042 PRINTS Leucine-rich repeat signature 684 697 - -
Pvu4g1066 1042 PRINTS Leucine-rich repeat signature 888 901 - -
Pvu4g1066 1042 SMART LRR_typ_2 306 327 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 888 911 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 104 128 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 462 486 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 778 802 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 681 705 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 631 652 IPR003591 -
Pvu4g1066 1042 SMART LRR_typ_2 411 435 IPR003591 -
Pvu4g1066 1042 SUPERFAMILY L domain-like 178 301 - -
Pvu4g1066 1042 Pfam Leucine Rich Repeat 890 910 IPR001611 GO:0005515
Pvu4g1066 1042 SUPERFAMILY L domain-like 11 514 - -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 215 301 IPR032675 -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 144 214 IPR032675 -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Pvu4g1066 1042 Gene3D Ribonuclease Inhibitor 533 961 IPR032675 -
Pvu4g1066 1042 Pfam Leucine rich repeat 730 791 IPR001611 GO:0005515
Pvu4g1066 1042 Pfam Leucine rich repeat 660 718 IPR001611 GO:0005515
Pvu4g1066 1042 Pfam Leucine rich repeat 82 139 IPR001611 GO:0005515
Pvu4g1066 1042 SMART LRR_sd22_2 411 437 - -
Pvu4g1066 1042 SMART LRR_sd22_2 631 649 - -
Pvu4g1066 1042 SMART LRR_sd22_2 657 683 - -
Pvu4g1066 1042 SMART LRR_sd22_2 729 754 - -
Pvu4g1066 1042 SMART LRR_sd22_2 360 387 - -
Pvu4g1066 1042 SMART LRR_sd22_2 104 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1066 Pvu-Chr4 29365951 29369464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1066 11 958 Receptor kinase-like Gene Family AT2G15080 31.590 5.29e-78 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1066 - - gmx:102663251 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1066 4 29365951 29369464 Pvu4g1066 4 29365951 29369464 ECH