Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1022 ATGGTTCTCTTGAACGGTACAAAGCCCGTCTTGTCGCCAAAGGATTCCACCAACGTCTTAAATGGCGAATTTCCGAGCTTCATTCAAAATTCTTCATGGTGCAGCAGAAACATACAGGTATTGAACTTATCACATAACCAAATTACTGGCAAGATACCCGAGAGCATCAGACTGCTATCTGAGTTGGAGTATGTATCGTTAGAGGGGAATTCTTTAGAGGGTGATGTTACTGAATCTCATCTTTCTAATTTTTCCAAATTACTTTGCTTATACTTGTCACACAACTCTTTGTCTCTAAAATTTGTCTCTGGTTGGATACCTCCTTTTCGATTAAGTTTCTTGGGTCTTGCATCTTGCAAACTAGGACCGAGTTTTCCTAGTTGGCTCCAGACTCAAAATTCCTTAGTCGAACTAGATATATCTGATAATGGGCTGAATGATTTCGTACCAAAATGGTTTTGGAGCAAGTTGCAAATTCTGCAGGTTTTGAATATGTCTCACAATAATCTCCTTGGTTCAATCCCTAATATGCAATTGAAGCTTCCTTACAGACCGTTGATAAATTTAAATTCAAATAGATTTGAGGGAACAGTTCCATTCTTTTTTCTACAAGCCTCAGAGCTGCTACTCTCTGCAAATAAATTTTCAGATTTCTTATGTGGAAACGTCACAGCTTCACCTTTGGCCACTTTAGATTTATCATATAATCAAATAAAGGGGAAACATCCAGATTGTTGGAAATCTGTAAACCGATTATTGTTTCTTGATTTAAGCAGCAATCTATTGTCAGGAAAGATTCCTATCTCCATGGGCACTCTTGTTAAATTGGAAGCTTTGGTTTTACGAAACAATAGTTTAATGGGTGAATTGCCTTCCTCCTTGAAGAATTGCAACAATCTAATTATGATGGATTTGAGCGAGAATATGTTGTCCGGTCCAATACCATCATGGATTGGAGAAAGCATGCAGCAATTGATAATCTTGATCATGCGAGGGAATCACTTCTCTGGAAATCTTCCCCATCATCTCTGTTATTTGAAGCGTATTCAATTGTTTGATCTTTCCAGGAATAACTTATCAGGAGAAATTCCAACTTGCATAAACAATTTTACTGCATTGTCTGAAAACAGCATCAACAGTACTGAAACTGAGAATCGTGTGCATTGGTACAATAGTACTTACTTTGAAATTTATAGTCTTTACATTTCTTGTTATACACTTAAGATAACATGGATTTGGAAAGGAGTTCAACGCAGCTTTACACATCCCGAATTGATTCTTCATAGCATTGATCTCTCATGTAACAATTTAACTGGTAAAATGCCAAAAGAGATTGCAATTATGCTTGGGTTAGTTTCTCTGAATTTATCAAGAAACTCTTTGAGTGGAGAAATTCCTTCCAAGATTGGAAATTTACGTTCACTTGAATCCCTTGACCTGTCAAGAAATCAATTCTATGGGAGAATTCCTTCTTCTATTTCTCAAATGGATTTTCTTCAAAAATTAGACTTATCACATAACTCTCTTTGTGGAAGAATCCCATTGGGAAGACACTTGGATACATTTGATGCCTCTTGTTTTGAAGGAAATATTGATCTTTGTGGGAAACCGCTTCAAAAAGGTTGTCCTGAAGATGAGACAGTGATAAAGTCTAAAGTAGCAGAAGGGCATGATGAAAATGATAATTCAGTTTTCTATGGAGCATTATACATGAGCTTGGGGCTAGGATTCTTCACAGGTTTTTGGGGCTTATTTGGGCCATTACTACTTTGGCAACCGTGGAGAATTGCTTACATGAAATTCTTGAACAGACTGATAGACTATCTATTTGTAATTCTTGAAGTGAACATAGCAAAGTGCCAAAGGTGGCTCAAAGACTAG 1881 0.3695 MVLLNGTKPVLSPKDSTNVLNGEFPSFIQNSSWCSRNIQVLNLSHNQITGKIPESIRLLSELEYVSLEGNSLEGDVTESHLSNFSKLLCLYLSHNSLSLKFVSGWIPPFRLSFLGLASCKLGPSFPSWLQTQNSLVELDISDNGLNDFVPKWFWSKLQILQVLNMSHNNLLGSIPNMQLKLPYRPLINLNSNRFEGTVPFFFLQASELLLSANKFSDFLCGNVTASPLATLDLSYNQIKGKHPDCWKSVNRLLFLDLSSNLLSGKIPISMGTLVKLEALVLRNNSLMGELPSSLKNCNNLIMMDLSENMLSGPIPSWIGESMQQLIILIMRGNHFSGNLPHHLCYLKRIQLFDLSRNNLSGEIPTCINNFTALSENSINSTETENRVHWYNSTYFEIYSLYISCYTLKITWIWKGVQRSFTHPELILHSIDLSCNNLTGKMPKEIAIMLGLVSLNLSRNSLSGEIPSKIGNLRSLESLDLSRNQFYGRIPSSISQMDFLQKLDLSHNSLCGRIPLGRHLDTFDASCFEGNIDLCGKPLQKGCPEDETVIKSKVAEGHDENDNSVFYGALYMSLGLGFFTGFWGLFGPLLLWQPWRIAYMKFLNRLIDYLFVILEVNIAKCQRWLKD* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1022 626 Pfam Leucine rich repeat 427 485 IPR001611 GO:0005515
Pvu4g1022 626 Pfam Leucine rich repeat 228 286 IPR001611 GO:0005515
Pvu4g1022 626 PANTHER OS10G0469600 PROTEIN 16 612 - -
Pvu4g1022 626 SUPERFAMILY L domain-like 27 220 - -
Pvu4g1022 626 Pfam Leucine Rich repeat 35 51 IPR001611 GO:0005515
Pvu4g1022 626 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 612 - -
Pvu4g1022 626 SUPERFAMILY L domain-like 204 539 - -
Pvu4g1022 626 ProSiteProfiles Leucine-rich repeat profile. 37 59 IPR001611 GO:0005515
Pvu4g1022 626 Gene3D Ribonuclease Inhibitor 103 545 IPR032675 -
Pvu4g1022 626 Gene3D Ribonuclease Inhibitor 14 102 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1022 Pvu-Chr4 27028009 27029889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1022 37 547 Receptor kinase-like Gene Family AT4G04220 33.843 7.64e-69 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1022 - - vun:114180773 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1022 4 27028009 27029889 Pvu4g1022 4 27028009 27029889 ECH