Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1002 ATGGGACACGACGAGTTGGTGACAGTTGAAAACGTATCCGGAGATAAGCTTGAATCAACTGCTTCTGAGAAGGAAGAGAATTGGAGTGAAAATTTGAAGCAGAATTCTTCAGAGGTTAATTGTGCACTTGGAGTAGGTTTGGACCATTTCATCCCAGAGCCTGTTGGAACTGAGAGTAACCTGCTTGTTGCTGCTTCTGATGAGATTATGTTTTCTAAATCAATGATGGAATTTTGGGATTCTCCAAGGCAAGACCTAATAGTGGACAGGCTATCAGAGTGTGAGAAGCAAAAGCTGCTTAACCTTGTGAAGATACAAAATGATGGGACTGTTGAAGTTGATCTGGAAAAAGATGCAGCTCTTGTATCAGAATTGTTGAAGTTTCAATCTTTTGAAGAGTCAACAATGAGTGCAAGTGTTGTTTCTGAATCAAAAATATCAACTCCCTGGTTACAAATTGTCATGCTTGTGGTTGGGACTAGAGGCGATGTACAACCTTTCCTGGCCATCGCAAAAAAACTCCAGGACTATGGTCATCGTGTTAGGTTGGCAACACATGCTGATTTTGACACATTTGTAAAGAGTGCTGGTGTTGATTTCTATCCGTTGGGTGGTGATCCTCGTGCTTTGGCAAGATATATGGTGAGGAATAAAGGTATAATCCCATCTGGTCCAACTGAAATATCTATCCAAAGAAAGCAGCTGAAGGCTATTATAGATTCTCTTCTTCCAGCATGCATAGAACCTGATTTGGAAACTGGTGTTCCATTCAGAGCTCAGGCCATTATAGCCAATCCTACTGCATGTGGACATACACACATTGCTGAAGCCCTTGGGGTGCCCCTTCACATCTTCTTCACTATGCCTTGGACGCCAACATATGAGTTTTCACACCCTTTGGCACGTGTTCCTCAAAGTGCTGGTTATTGGTTGTCATATATAATTGTGGATGCACTAATATGGTGGGGAATACGAGGACTTATCAATGACTTCAGGAAAAGAAAATTGAAGCTCGCTCCTATTGCATACTTTAGTATGTACAGTGGATCAATAAATCATTTACCTACCGGCTATATGTGGAGTCCTCATGTTGTTGCAAAACCAAGTGACTGGGGCCCCTTAGTTGATGTCGTTGGTTATTGTTTCTTGAACCTTGGATCAAAGTATCACCCACAAGAAGATTTTGTCCGATGGATTCAAAACGGACCAAAACCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGATGATCCTAAAAGAACTACTGATGTTATAGTGGAGGCACTGAAGGATACAGGACAACGGGGAATTATTGACCGGGGCTGGGGGAATCTAGGCGATTTGGCAGAAGTTCCCGACAATGTTTTTGTGCTAGAGGAATGCCCTCATGACTGGTTGTTTCCCCAATGTTCTGCTTTGGTACATCATGGTGGTGCTGGAACAACGGCTACAGGACTAAAGGCTGGGTGTCCAACAACCATTGTTCCATTCTTTGGAGATCAATTCTTTTGGGGAGACAGAATTTATCAGAAAGGGCTGGGACCTATTCCAATTCCTATATCTCAGCTTAGTCTTGAAAGTTTAACAAATGCCATAAAATTCATGCTCCAGCCAGAGGTAAAATCACAAGCAATGGCAATCTCAAAGTTGATTGAGAATGAAGACGGTGTTACAGCTGCAGTTGATGCGTTTCACCGCCATCTACCCCCAGAACTACCACTACCAATTCCATCTCCAGAGGTGGAGGACCAAGCAAATCCTTTGCAGTGGTTTTTTCTTCATCTAGCGAAGTTGTGCACTTTACCTTGTGGGAGTGTATAG 1821 0.4278 MGHDELVTVENVSGDKLESTASEKEENWSENLKQNSSEVNCALGVGLDHFIPEPVGTESNLLVAASDEIMFSKSMMEFWDSPRQDLIVDRLSECEKQKLLNLVKIQNDGTVEVDLEKDAALVSELLKFQSFEESTMSASVVSESKISTPWLQIVMLVVGTRGDVQPFLAIAKKLQDYGHRVRLATHADFDTFVKSAGVDFYPLGGDPRALARYMVRNKGIIPSGPTEISIQRKQLKAIIDSLLPACIEPDLETGVPFRAQAIIANPTACGHTHIAEALGVPLHIFFTMPWTPTYEFSHPLARVPQSAGYWLSYIIVDALIWWGIRGLINDFRKRKLKLAPIAYFSMYSGSINHLPTGYMWSPHVVAKPSDWGPLVDVVGYCFLNLGSKYHPQEDFVRWIQNGPKPLYFGFGSMPLDDPKRTTDVIVEALKDTGQRGIIDRGWGNLGDLAEVPDNVFVLEECPHDWLFPQCSALVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQKGLGPIPIPISQLSLESLTNAIKFMLQPEVKSQAMAISKLIENEDGVTAAVDAFHRHLPPELPLPIPSPEVEDQANPLQWFFLHLAKLCTLPCGSV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1002 606 Gene3D Glycogen Phosphorylase B; 382 551 - -
Pvu4g1002 606 Gene3D Glycogen Phosphorylase B; 153 556 - -
Pvu4g1002 606 MobiDBLite consensus disorder prediction 10 31 - -
Pvu4g1002 606 CDD GT1_Gtf-like 153 567 IPR002213 GO:0008194
Pvu4g1002 606 Pfam Glycosyltransferase family 28 N-terminal domain 153 295 IPR004276 GO:0005975|GO:0016758|GO:0030259
Pvu4g1002 606 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 406 550 IPR002213 GO:0008194
Pvu4g1002 606 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 153 568 - -
Pvu4g1002 606 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 13 604 - -
Pvu4g1002 606 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 13 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1002 Pvu-Chr4 25563683 25579261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1002 174 606 Glycosyltransferase AT1G43620 77.346 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1002 K05841 - gmx:100797391 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1002 4 25563683 25579261 Pvu4g1002 4 25563683 25579261 ECH
Pvu4g1002 4 25563683 25579261 Pvu7g0831 7 7744899 7757014 PCT