Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0977 ATGGCAACCAAGCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGACCAGATGCTAGGTCACTGCTTGTTACCTTGCTGCTGATCATTGTTCCAGTTATCGTCTTTTGTGTATTTGTAGCAAGACATCTTCGCCATGAATTTTCTTCGTATAATGCAGGATATGCTATTTTGGTGGTTGCAGTTCTCTTTAATATTTATGTGTTGATTCTTCTATGTCTTACTTCCTCACGTGATCCGGGTGTTATCCCAAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCAGTTGATATTGGGGGGCGCCAAACTCCAAGCCTTCAGTTCCCTCGCACAAAAGAAGTAATGGTCAATGGGCATCCTGTGAGGGTGAAGTATTGTGATACTTGTATGCTGTATCGTCCTCCTCGTTGTTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAGTGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCAGCAACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGAACCATTATCACGGGACAGTTTGGACAGCAATGAAAGAATCCCCTGCATCAGTTATATTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTTACCGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTTCGGTATAGAGCCGATAACAGGCTCAATGTTTACAACCGGGGTTGTTTAAACAATTTCCTGGAAGTATTTTGTACAAAAGTGAAGCCCTCTAGGAACAATTTCCGAGCTTTTGTCCAAGAGGACGTACCAAGGCCACCCCCTCAAATCATTTCCCGGGAATCTGAACCGGATCTGGGAGGAGACCCTCGTTCTAAAGTTGAAGACGATCTGGATATCGGTGAAGACCTGTTAAAGATATCTCAGCGCCGGAATATTGAAGAAATTGATGAGGACATCCGGAGTAGAGGGAGTAATGGGCCTGCCCATAATACATCTGAAGTTGATTCAGTTTTGGGTTCAGATCGTAGGGCCCCAACAATTCGATCTGAAGCAAGGCACTCAAGTGAGGGAAGAAGTGAAAGCTGGGAAATTTCTTCCGAGGTCCTTGCCAATTCAAATTTAACTGAAACTAGAGGCTATGTTGCATCAAAGGAGGTGCGCCAAAAACTTGGGGGTTCTTTCTGA 1290 0.4295 MATKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLCLTSSRDPGVIPRNLHPPEEEFRYDSSVSVDIGGRQTPSLQFPRTKEVMVNGHPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMNHYHGTVWTAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRLNVYNRGCLNNFLEVFCTKVKPSRNNFRAFVQEDVPRPPPQIISRESEPDLGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSNGPAHNTSEVDSVLGSDRRAPTIRSEARHSSEGRSESWEISSEVLANSNLTETRGYVASKEVRQKLGGSF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0977 429 MobiDBLite consensus disorder prediction 380 395 - -
Pvu4g0977 429 ProSiteProfiles DHHC domain profile. 139 189 - -
Pvu4g0977 429 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
Pvu4g0977 429 PANTHER S-ACYLTRANSFERASE 6 424 - -
Pvu4g0977 429 MobiDBLite consensus disorder prediction 305 330 - -
Pvu4g0977 429 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 424 - -
Pvu4g0977 429 MobiDBLite consensus disorder prediction 352 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0977 Pvu-Chr4 24291189 24302068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0977 65 285 Lipid Metabolism Gene Families AT4G22750 26.957 4.89e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0977 K16675 - gmx:100818705 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0977 4 24291189 24302068 Pvu4g0977 4 24291189 24302068 ECH
Pvu4g0977 4 24291189 24302068 Pvu7g0846 7 8108799 8113484 PCT