Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0954 ATGAAGCATCATCATAGGTCACCACACCACCAACAGCTCTTCTGGGCAAAGGTAGTCATGCGTAAGTGGCTTAACATGGGGAGTTATGAGTCTGATTACAGTGCTGACCCTGATGACGATGAAGATGATTCTGAAAGTGGTTCAGACAACGAAGAGTGGGGAAGACAGTCGCGGTTTGCAGACAACAGAGGTGATGAAGATGAAACTCCTGCTGAATCTACAGAATTTCTTCCAAAGTTAAGGAGGCAAAAGTCATCAACTTTTAGATCTCAGTATATAAACAAAAAGGAGTTGAAGATATGTGTTGGAACATGGAATGTTGGAGGAAAACTTCCACCTGATGACCTTGATATTGATGATTGGCTTGGTGTCAATGAACCAGCTGACATCTATGTACTTGGTCTTCAAGAGATTGTACCCTTAAACCCTGGTAATGTTTTTGGTGCTGAAGATACTCGTCCTGTTACAAAATGGGAGAATATTATTCGAGAAACACTGAATAGAGTTCGACCTGAAATACCAAAGATAAAGTCCTTTAGTGACCCTCCCTCTCCATCAAAGTTTAAGCCATCAGATGATGTTCCTGATATAGAAGAAGAAATATTACTTGAAAGTGATAGTGACATTGGTGAGGAAGTGCATCCTTTGGATGAAGACAACAATTTTTATGATGAAGGTGCCGATGGAACAATCATGGGTGAAAGTGAGAGTACAAATTTATTAGCTTCTGCTGCTACTGATATTGTAAACTCCAGTTTGCCAGTTAAAACTGATTTACAGAGACAGTTTTCTTTTCCAAAGATGTTTGATAGGCATCAGGGTTTGTCGGAAAACATGGACACATCATTTTCCCAACAGGCCACTAAACTAAGCCGAATGCTTAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCAGAGCCTCCACTGCATCTGCTATCTCAGAGAGTTTTGGATAGACCAACTTCTTTTAAATCATTGAAATCCTTTAAATCATCTAAGTCGTTCAAAACATATAACTCTTTCAAGTCAATTATGGATGAAATTCCAGGGACAGTATTGTTTCCTGAAATTGACCTTGAAGCTTTGATAAAGCGAAAAAGAAGATCTTCATATGTAAGGATTGTTAGCAAGCAAATGGTTGGGATATTCATCACTGTATGGGTTCGTCGGAGCTTGCGTAAACATATTCAAAATTTAAAGGTTTCAACTGTTGGTGTTGGTCTTATGGGCTACATTGGTAACAAGGGATCAATATCTATCAGTATGTCCATACATCAGACGCTTTTTTGTTTCATATGTACCCACCTTACATCAGGTGAAAAAGAAGGAGATGAACTTAAAAGGAATGCTGATGTTCATGAAATACTTCGTAGGACCCAATTCCACTCACTTTCTTATATAGGGCTTCCCAAAAGAATCCTTGCTCATGAAAGGATAATTTGGTTGGGTGATCTGAATTATCGTATCAACTTATCAAATGTGGAAACAAAAGCTCTTATTTCGAAAAAGCAGTGGTCAAAATTGGTAGAGAAAGACCAGCTCATGCGAGAACTCAAGAACGGTGTGTTTGGAGGATGGTCAGAAGGCATATTAAACTTTCCACCAACTTACAAGTATGAGGTTAATTCAGATAAATACTATGGAGAGGATCCCAAGGTTGGAAAGCGCTCACCGGCATGGTGTGATCGTATTCTTTCATATGGCAAAGGGATGAAGTTGTTGACTTACAGAAGGGCAGAGCTCAAACTGTCCGATCACAGACCTGTGACAGCCACATATATGGTTGAGGTTGAGGCATTCTCTCCTAGGAAACTACAGCGAGCTCTAACTTTTACTGATGCAGAGATACAAAATGAACAAGTCATAACAAATTTGAGTAATTGGAACTTAGCTGCTTAA 1899 0.396 MKHHHRSPHHQQLFWAKVVMRKWLNMGSYESDYSADPDDDEDDSESGSDNEEWGRQSRFADNRGDEDETPAESTEFLPKLRRQKSSTFRSQYINKKELKICVGTWNVGGKLPPDDLDIDDWLGVNEPADIYVLGLQEIVPLNPGNVFGAEDTRPVTKWENIIRETLNRVRPEIPKIKSFSDPPSPSKFKPSDDVPDIEEEILLESDSDIGEEVHPLDEDNNFYDEGADGTIMGESESTNLLASAATDIVNSSLPVKTDLQRQFSFPKMFDRHQGLSENMDTSFSQQATKLSRMLSGSERIGLSWPEPPLHLLSQRVLDRPTSFKSLKSFKSSKSFKTYNSFKSIMDEIPGTVLFPEIDLEALIKRKRRSSYVRIVSKQMVGIFITVWVRRSLRKHIQNLKVSTVGVGLMGYIGNKGSISISMSIHQTLFCFICTHLTSGEKEGDELKRNADVHEILRRTQFHSLSYIGLPKRILAHERIIWLGDLNYRINLSNVETKALISKKQWSKLVEKDQLMRELKNGVFGGWSEGILNFPPTYKYEVNSDKYYGEDPKVGKRSPAWCDRILSYGKGMKLLTYRRAELKLSDHRPVTATYMVEVEAFSPRKLQRALTFTDAEIQNEQVITNLSNWNLAA* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0954 632 MobiDBLite consensus disorder prediction 32 74 - -
Pvu4g0954 632 PANTHER TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 13 627 - -
Pvu4g0954 632 Gene3D Endonuclease/exonuclease/phosphatase 323 624 IPR036691 -
Pvu4g0954 632 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 13 627 IPR045849 GO:0004445|GO:0046855
Pvu4g0954 632 MobiDBLite consensus disorder prediction 49 74 - -
Pvu4g0954 632 Pfam Endonuclease/Exonuclease/phosphatase family 398 586 IPR005135 GO:0003824
Pvu4g0954 632 MobiDBLite consensus disorder prediction 33 48 - -
Pvu4g0954 632 Gene3D Endonuclease/exonuclease/phosphatase 77 181 IPR036691 -
Pvu4g0954 632 SMART i5p_5 273 601 IPR000300 GO:0016791|GO:0046856
Pvu4g0954 632 SUPERFAMILY DNase I-like 81 611 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0954 Pvu-Chr4 20913324 20921454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0954 369 597 Acyl Lipid Metabolism Gene Families AT1G65580 31.136 1.40e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0954 - - gmx:100811025 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0954 4 20913324 20921454 Pvu4g0954 4 20913324 20921454 ECH