Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0952 ATGAAGAATGGAACGTTTCAATTCCAACTTCAACTTCACTTCTCCACTGTAACACTCGCCATGGTTCTTCTCCAGACATGGAGACAAACGGCTTTTTCTGTTTTTGGGTACCTAAATTTCACCAAAGCTGCTTTCCTTGATCATTCTAGGAACTTCAAACCAGAGGACATGGAAATACAAATGCCTGGGAAAAATTGCATTGTTACTGGTGCTAACTCTGGAATTGGCTATGCAACGGCTGAGGGTCTAGCAAAGCGTGGTGCAACTGTCTATCTTGTATGTCGTAATAAGGAGAGAGGAGAGGCTGCTCTTTCTGAAATTCAAACTAGAACTGGCAACCAAAATGTTCATTTGGAGATTTGTGACCTTTCTTCTGTCAATGAGATCAAGTCATTCACTTCCAGGTTTTCTAAAAGAAATGTGCCACTTCATGTGTTGGTTAACAATGCCGGCATACTTGAGCAAAATCGAGTCACCACACCAGAAGGGTTTGAGTTGAACTTTGCTGTAAATGTGTTGGGAACTTACACCATAACAGAATTAATGGTTCCAATACTGGAGAAAGCTTCCCCTGATGCGCGTGTCATTACAGTTTCTTCTGGTGGAATGTATACTTCTCCTTTGACCAAAGATCTACAGTATTCAGACAGCAATTTTAACGGGGTTAAACAATATGCTCGAAACAAGCGTGTTCAGGTCAGTTAA 705 0.4128 MKNGTFQFQLQLHFSTVTLAMVLLQTWRQTAFSVFGYLNFTKAAFLDHSRNFKPEDMEIQMPGKNCIVTGANSGIGYATAEGLAKRGATVYLVCRNKERGEAALSEIQTRTGNQNVHLEICDLSSVNEIKSFTSRFSKRNVPLHVLVNNAGILEQNRVTTPEGFELNFAVNVLGTYTITELMVPILEKASPDARVITVSSGGMYTSPLTKDLQYSDSNFNGVKQYARNKRVQVS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0952 234 Pfam short chain dehydrogenase 64 202 IPR002347 -
Pvu4g0952 234 Gene3D - 50 234 - -
Pvu4g0952 234 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 206 IPR036291 -
Pvu4g0952 234 PANTHER RETINOL DEHYDROGENASE 27 233 - -
Pvu4g0952 234 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 70 87 IPR003560 GO:0008667|GO:0019290
Pvu4g0952 234 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 182 IPR003560 GO:0008667|GO:0019290
Pvu4g0952 234 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 27 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0952 Pvu-Chr4 20889373 20891968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0952 56 200 Miscellaneous Gene Families AT2G29340 32.450 2.81e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0952 K11168 - gmx:100775215 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0952 4 20889373 20891968 Pvu4g0952 4 20889373 20891968 ECH