Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0943 ATGAATTTATCATTCATTGTTACATTCATGATTGTATTGTGTGGTTCAAACATGATTGTTTGCAGGGGAGAATGGGAAGCCCCTTGGAGCAGAAAAGCTGCAGAAGAAGCTGAGGCTGTGGCAGCCATAGAATGTTCAGGACATGGAAGTGCATACCTTGATGGTCTTGTTCTTAAAGGCCATAAACAAGTTTGTGAGTGCAATCCATGCTACACTGGATCTGATTGCTCCAAGCTGTTATCTAATTGTTCTGCCAATGCTGGAAGTGGGGATCCATATTTTTTGGAGCCATTTTGGAAGAAACATGCCAGAAGCAGTGCTATATTAGTATCAGGGTGGCACAGAATGGGTTATACTTATAGTGATGGATCATACATCTCACAACTATTGGTGGACCATATCCAAAAACTTCATGACATAGTTGGAAATGCAATAACTGAAGGAAAACACATTGTATTTGGAAGTGGCTCAACACAACTCCTAAATGCTGCAGTTTATGCCTTGTCTCCCGATACATCTTCACTATCTCCAGCAAAAGTAGTTGCCACACCACCATATTACCCTGTGTACAGAACACAGACACAATTTTTCAATGCTAGGAATTTTAGTTATGAAGGAAGCACATCCTCATGGATTAACAAGACAGATAGTAACTCTACATTCATTGAGTTTGTCACTTCACCAAACAATCCTGATGGAAAGTTGACTAAGGGAGTTCTTGAAGGTGATAATGTGAAATACATTTATGATCGTGCCTATTATTGGCCACATTACACTGCCATTCCTTCACCAGCTGATGATGATCTTATGATCTTCACAATTTCCAAGCTCACAGGCCATGCTGGGAGCCGATTTGGATGGGCAATAATAGAGGATGAAGCAGTATATGAAAAGATGTTGACATATTTGGATATGAACACCATGGGAGTTTCCCGCGAGGCTCAGCTGAGAGCTTTAAAGCTTTTGGACGTTGTTCTTGAAGGAGATGATGGAAAAGAGATATTCAAATTTGCATATTCAACCATGAGACATCGTTGGATAAAGTTGAAAGAAACCATATCTAAATCAAAACGCTTTTCTCTGCAGAAACTGTCTTCCCAATACTGCACCTTCTTCAAAAGGGAAAGAGATCTCTCACCAGCTTACGCTTGGTTGAAGTGTGAGAGAGAAGAAGACAAAAACTGCTATGAAATCCTTGAAGCTGCTGGCATCAATGGTCGTACAGGAAGTCTATATAGTGATGATGATCATTACGTGCGTCTCAGTCTGATTAGAAGCCAATATGATTTTGATATACTCATAAACAAGCTCAAAACCCTTGTTGCTAAACAATAG 1335 0.4007 MNLSFIVTFMIVLCGSNMIVCRGEWEAPWSRKAAEEAEAVAAIECSGHGSAYLDGLVLKGHKQVCECNPCYTGSDCSKLLSNCSANAGSGDPYFLEPFWKKHARSSAILVSGWHRMGYTYSDGSYISQLLVDHIQKLHDIVGNAITEGKHIVFGSGSTQLLNAAVYALSPDTSSLSPAKVVATPPYYPVYRTQTQFFNARNFSYEGSTSSWINKTDSNSTFIEFVTSPNNPDGKLTKGVLEGDNVKYIYDRAYYWPHYTAIPSPADDDLMIFTISKLTGHAGSRFGWAIIEDEAVYEKMLTYLDMNTMGVSREAQLRALKLLDVVLEGDDGKEIFKFAYSTMRHRWIKLKETISKSKRFSLQKLSSQYCTFFKRERDLSPAYAWLKCEREEDKNCYEILEAAGINGRTGSLYSDDDHYVRLSLIRSQYDFDILINKLKTLVAKQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0943 444 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 7 443 - -
Pvu4g0943 444 Gene3D - 27 126 IPR037029 GO:0016846
Pvu4g0943 444 Gene3D - 127 332 IPR015421 GO:0003824
Pvu4g0943 444 Pfam Allinase 86 441 IPR006948 GO:0016846
Pvu4g0943 444 CDD AAT_like 86 438 - -
Pvu4g0943 444 SUPERFAMILY PLP-dependent transferases 29 441 IPR015424 -
Pvu4g0943 444 Pfam Alliinase EGF-like domain 29 83 IPR006947 GO:0016846
Pvu4g0943 444 Gene3D Aspartate Aminotransferase, domain 1 333 442 IPR015422 GO:0003824
Pvu4g0943 444 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 7 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0943 Pvu-Chr4 19436420 19438994 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0943 - - var:108345120 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0943 4 19436420 19438994 Pvu4g0943 4 19436420 19438994 ECH