Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0942 ATGTCTGTTTCAATGGCTGCTTCCAGTGAAAGGTGGATTGACCGTCTTCAGTTCTCCTCGTTGTTCTGGCCTCCCCCACTGGAAGATCAACAAAGAAAGGATCAAATTGCTGCGTATGTTGAATACATTGGTCAATTTACATCAGAACAATTTCCTGATGATATTGCTGAGTTGATCCGCAATCGGTATCCATCAAAAGAAATGCTCCTCTTTGATGAAGTTTTGGCGGTACTTGTCCTTCATCATCCTGAGCATGGGCACGCAGTTGTGCTTCCAATCATTTCATGTATTATTGATGGTACGCTGGTCTATGACAAGACTAGTCCTCCATTTGCTTCTTTCATTTCTTTAGTCTGCCCAAAAAATGAGAATGAATATTCAGAACAATGGGCTCTGGCATGCGGAGAAATTTTGCGTATCTTAACTCTTTACAATCGCCCCATATACAAAATGGAAAGACAATACTGTGAAGCAGAAGGAAGCAGTGGCGGGAGCCATGCAATGGTTAATGATTCCGCATATGGGGAGTCTGGCCATAACTCTATGATGCAGCAGGAGAAGAAGCCTACAAGACCGTTGTCCCCGTGGATTACTGATATATTATTGGCTGCACCTTTAGGCATTAGAAGTGACTATTTTCGGTGGTGCAGTGGTGTTCTGGGTAAATATGGCGCAGGAGAACTCCAGCCACCCATGATTGTTTCTGCACGTGGTTCTGGGAAGCATCCTCAACTGATGCCGTCAACTCCAAGATGGGCAGTTGCTAATGGTGCTGGTGTTATATTAAGTGTTTGTGATAATGAAGTTGCTCGTTATGAGACTGCTACTTTAACAGCAGTTGCTGTCCCTGCACTACTACTTCCTCCTCCAACAACAGCTTTGGATGAGCATCTTGTTGCTGGATTACCAGCTCTAGAACCATATGCACGTTTATTTCACAGATATTATGCCATTGCAACTCCCAGTGCAACTCAAAGGCTTCTTCTTGGACTGTTAGAAGCACCCCCATCATGGGCTCCGGATGCACTTGATGCTGCTGTGCAGCTTGTAGAACTTCTTCGAGCTGCTGAAGAATATGCTTGTGGAATAAGGCTCCCTAGAAATTGGATGCATTTTCATTTCTTGCGGGCCATAGGCACTGCAATGTCCATGAGATCTGGTGTAGCTGCAGATGCTGCAGCTGCATTGCTTTTCCGAATACTTTCTCAGCCTGCTTTACTTTTCCCTCCATTAAGGCAAGTTGATGGAGTTGAAATTCAACATGAACCTTTGGGTGGCTATATTTCTTCCAACAGAAAGCAGATTGAAGCTGCTGCTGCTGAAGCCACCATTGAAGCCACAGCCCAGGGCATTGCCTCAATGCTTTGTGCTCATGGTCCAGAGGTTGAGTGGAGAATTTGTACCATATGGGAGGCTGCTTATGGCTTGATTCCATTAAATTCTTCAGCTGTTGATCTACCAGAAATTGTGGTCGCAACACCACTTCAACCTCCCATACTCTCATGGAATTTGTACATACCCCTACTCAAGGTTTTGGAATATCTTCCTCGTGGAAGTCCATCTGAAGCATGTCTCATGAAAATATTTGTTGCTACAGTGGAAGCTATTCTTCAGAGGACATTTCCAGCTGAGCCCATTAGTGATCAAAAAAGAAAAACACGATACTATTTTGTGGGCTCTGCCTCTAAAAACCTTGCCGTGGCAGAACTTCGTACCATGGTGCATTCACTTTTCTTAGAATCATGTGCATCTGTTGAGCTTGCTTCACGCCTACTATTTGTTGTCTTAACTGTCTGTGTTAGTCATGAGGTCAAATTCAATGGAAGCAAGAAACCAAGAGGTGAAGATAATTATTTGGAGGAAGTGATTGAGGATTTATTTCCAGTGTCTGAAAGCCAGAAAGAAACAAAAAATCGGAAAATAAAGAAGCAAGGTCCTGTATCAGCATTTGATTCTTACGTTCTGGCTGCTGTTTGTGCTCTTGCCTGTGAGCTTCAGTTGTTCCCTACGGTTTCGCGAGGAAACAATCGTTCAGTCCTCAATAAAGTAGAAAAGATAGCCAAGCCTTCCAAAATAGATGAATCTTCCCATGCATTGCAGAAATGCATAGATTCAGCAATACGCCATACCCATAGAATTTTAGCAATTTTAGAGGCGCTATTTTCATTGAAGCCCTCTTCTGTTGGTACCTCATGGAGTTACAGCTCAAATGAAATAGTTGCAGCAGCTATGGTTGCTGCACATATTTCTGAACTATTTAGACGGTCAAAAGCTTGCATGCGTGCTCTGTCTGTTTTGATACGTTGCAAATGGGATGATGAAATTCACTCTAGGGCATCGTCATTGTACAATCTCATAGATATTCACAGCAAAGCTGTTGCATCCATAGTAAACAAGGCAGAACCATTCGGAGCAACCTTAATTCATACCCCTATTTGTAAAGACCCCTGTGGTAGTATTAAAGGACAAAACCAGTTTGAAAATAGTAGCCACCTGGACCCTGGGCAGACATCTACTTCAATCTCTACAGATTCATCCCCCTTGGAACTCGGTAAAAGATGTGATAGAACTTCATATTCAAATGAAGCATCGGGATGTACCTTTGGAAAAGGAGCCACAAGTCTCGCATTCGATGCTTCTGATCTAGCCAACTTCCTAACTATGGACAGGCATATAGGATTCAATTGCAGTGCCCAAATTTTTCTTAGATCCAGGCTCGCAGAGAAGCAAGAGTTATGCTTCTCTGTAGTATCACTACTATGGCAGAAGTTGATTGCATCTCCTGAGACTCAACCTTGTGCAGAAAGCACTTCTGCTCAACAGGGGTGGAGACAGGTTGTTGATGCATTATGCCAGGTTGTATCTGCATCACCTATGAAAGCAGCTACGGCAGTTGTTCTTCAGGCCGAAAAGGAATTGCAGCCATGGATTGCTAAAGATGACAATCTTGGTCAGAAGATGTGGAGAATCAATCAGCGGATTGTAAAATTGATAATTGAACTAATGAGGAATCATGATAGTTTAGAATCATTAGTAGTTGTGGCAAGTGCATCAGATTTACTACTACGAGCCACCGACGGTATGCTAGTGGATGGAGAAGCTTGCACTTTAACACAGCTTAAGCTATTGGAAGCAACCGCTAAAGCGGTTCAGCCTGTGATTGAGTTGGGAGAATCTGGTTTCGCGGTGGCAGATGGCCTTTCAAACCTGCTAAAGTGTCGCCTACCAGCTACAATCAGATGCCTTTCTCATCCTAGTGCACATGTCCGTGCTCTCAGCACTTCAGTTCTTCGTGATATTTTGCATACTTGTTCAATTAGAAGATACAGTCCTAAGAGACCGCAAAAGAATGACATCCATAATCAATACTTCAATTTGGATGTCATTGACTGGCAAGCTGACATAAACAAATGCTTGACATGGGAAGCTCACAGCCAGCTTTTAAATGGAATGTCTATTGAATATCTTAACACAGCTGCGAGGGATTTAGGCTTTGGAATTTCTATCTAA 3510 0.4313 MSVSMAASSERWIDRLQFSSLFWPPPLEDQQRKDQIAAYVEYIGQFTSEQFPDDIAELIRNRYPSKEMLLFDEVLAVLVLHHPEHGHAVVLPIISCIIDGTLVYDKTSPPFASFISLVCPKNENEYSEQWALACGEILRILTLYNRPIYKMERQYCEAEGSSGGSHAMVNDSAYGESGHNSMMQQEKKPTRPLSPWITDILLAAPLGIRSDYFRWCSGVLGKYGAGELQPPMIVSARGSGKHPQLMPSTPRWAVANGAGVILSVCDNEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEEYACGIRLPRNWMHFHFLRAIGTAMSMRSGVAADAAAALLFRILSQPALLFPPLRQVDGVEIQHEPLGGYISSNRKQIEAAAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLPEIVVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEAILQRTFPAEPISDQKRKTRYYFVGSASKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVSHEVKFNGSKKPRGEDNYLEEVIEDLFPVSESQKETKNRKIKKQGPVSAFDSYVLAAVCALACELQLFPTVSRGNNRSVLNKVEKIAKPSKIDESSHALQKCIDSAIRHTHRILAILEALFSLKPSSVGTSWSYSSNEIVAAAMVAAHISELFRRSKACMRALSVLIRCKWDDEIHSRASSLYNLIDIHSKAVASIVNKAEPFGATLIHTPICKDPCGSIKGQNQFENSSHLDPGQTSTSISTDSSPLELGKRCDRTSYSNEASGCTFGKGATSLAFDASDLANFLTMDRHIGFNCSAQIFLRSRLAEKQELCFSVVSLLWQKLIASPETQPCAESTSAQQGWRQVVDALCQVVSASPMKAATAVVLQAEKELQPWIAKDDNLGQKMWRINQRIVKLIIELMRNHDSLESLVVVASASDLLLRATDGMLVDGEACTLTQLKLLEATAKAVQPVIELGESGFAVADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILHTCSIRRYSPKRPQKNDIHNQYFNLDVIDWQADINKCLTWEAHSQLLNGMSIEYLNTAARDLGFGISI* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0942 1169 MobiDBLite consensus disorder prediction 828 847 - -
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 8 26 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 126 150 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 187 207 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 207 225 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 236 254 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 254 275 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 281 299 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 305 325 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 330 349 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 349 369 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 381 403 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 453 476 IPR026211 GO:2000028
Pvu4g0942 1169 PRINTS Protein GIGANTEA signature 513 534 IPR026211 GO:2000028
Pvu4g0942 1169 PANTHER PROTEIN GIGANTEA-LIKE ISOFORM X1 5 1169 - -
Pvu4g0942 1169 PANTHER PROTEIN GIGANTEA 5 1169 IPR026211 GO:2000028
Pvu4g0942 1169 MobiDBLite consensus disorder prediction 828 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0942 Pvu-Chr4 18702121 18716535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0942 K12124 - gmx:100781641 2008.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0942 4 18702121 18716535 Pvu4g0942 4 18702121 18716535 ECH