Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0919 ATGGCCATGTTCGATTCCCTCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACTCTTCTGAAACTGACAATTCCGCGAATAAAGCTGTTAAGAAACAGAAGAGAGAATCAGTTGAAGAATATGCGGCGTGACATTGCCAAGCTACTTGAGACTGGCCAAGAAGCCACAGCTCGTATTAGGGTAGAACACATTATCAGAGAGGAGAATATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGTGAACTTATTGCTGTCCGCCTTCCAATAATTGAATCTCAAAGGGAATGTCCCCTTGACTTGAAGGAAGCTATATCTAGTGTATGTTTTGCTGCACCGAGGTGTGCGGATCTGCCAGAGCTGTTGCAGGTTCAGATGCTATTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTGCAACTGAGCTCAGGCCAGACTGCGGGGTTAATCGCCAGTTAATAGAGCTACTTTCAATTCGTGCACCTTCACCAGAAAAGAAACTGAACCTTCTGAAAGAAATTGCTGTTGAGCATGATTTAGAATGGGACCCGGCTGCTTCAGAAACTGAGTTCTTTAAAAAACATGAAGATTTATTGAATGGCCCCACCCAATTCTTTAGTGGGTCTAAGTTGCCCCTTCCTGATGAAAAGCCCCAGGAAGAGATGTACTCTTCTCATGAAACACCCAATAAAGAAGAACCTGATTCTGATTCTGGCTCTGATACATTAGAATTTCCTGAAGTTCCTAAAGTATCAGTACGGCCAAACGCAAATGTTGCCACAGCTCCTGAAATTGTTACACATCTGACTATGGAACCCCTTGAAGTTGATCTTGATTCATCAAGCAATTCTGGAGATTTTGAAGATGTCAAGCAGGAGCAAGTTGAAGATAGATCAACAGTTCACAAAAATGAACTCCATACTTCAATTGCCAAAGAGAATATACAGTTTGTGCCATTCATCTCTCCTCCAGCATTATCGTCTGGATCATTTTCTGCAAGACCTAGTGACTCTTCTCCCACCTTTTCAAGCGCAAAATCAGAACCCAAAGTGGACTTACAGGATGTGTTAGCTGCTGCCCATGCTGCTGCAGAAACTGCTGAACGTGCAGCAGCTGCAGCTCGCACAGCAGCTAGTCTTGCTCAAATCCGAATTAATGAGCTGACTAAGAAGAGAAGTGATGAACATGTATCCGACAGTAGCTCCGAGAACCCATTTTATGCTGGTGGTGATAATGAATCTCCAAAAAAGGATAAGCATTTCACCGAGCAAAATTCTGCAGGTAACTCTGATGTCCATAATAGAAAAGATCTTGAACATTACCAGGATCATTATACTTCCCCAGACTCTCATTCATCAAGTTTTCCTTCCTTTAACACACTCAAGGAAGATTATGATTCCTCCCCGCCCAGTAATCATGTACTGAATGACAACTTCTCTAGTCACCAGCCCAAGAGATTACCTTCAATGGATGACGACTCATACTTCTCATACCCCAACCTGTTTACCTCTCAAAACTCTAGTGTTGGATCTCAGACACATTCAGATCATAGCCGTTCCCCTCATGATCTGTGA 1578 0.4265 MAMFDSLFNKGFKAAKCKTLLKLTIPRIKLLRNRRENQLKNMRRDIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLFAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLEWDPAASETEFFKKHEDLLNGPTQFFSGSKLPLPDEKPQEEMYSSHETPNKEEPDSDSGSDTLEFPEVPKVSVRPNANVATAPEIVTHLTMEPLEVDLDSSSNSGDFEDVKQEQVEDRSTVHKNELHTSIAKENIQFVPFISPPALSSGSFSARPSDSSPTFSSAKSEPKVDLQDVLAAAHAAAETAERAAAAARTAASLAQIRINELTKKRSDEHVSDSSSENPFYAGGDNESPKKDKHFTEQNSAGNSDVHNRKDLEHYQDHYTSPDSHSSSFPSFNTLKEDYDSSPPSNHVLNDNFSSHQPKRLPSMDDDSYFSYPNLFTSQNSSVGSQTHSDHSRSPHDL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0919 525 MobiDBLite consensus disorder prediction 389 525 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 327 349 - -
Pvu4g0919 525 Coils Coil 32 59 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 215 239 - -
Pvu4g0919 525 Gene3D - 5 192 IPR042277 -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 285 303 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 497 516 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 278 303 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 413 447 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 204 250 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 448 486 - -
Pvu4g0919 525 MobiDBLite consensus disorder prediction 327 353 - -
Pvu4g0919 525 PANTHER IST1 FAMILY MEMBER 1 513 IPR005061 GO:0015031
Pvu4g0919 525 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 1 513 - -
Pvu4g0919 525 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0919 Pvu-Chr4 17756004 17760433 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0919 - - vun:114181996 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0919 4 17756004 17760433 Pvu4g0919 4 17756004 17760433 ECH