Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0915 ATGGGAGAAAACAAAGATCAGGATTTCTTTTCCCACAAATTTCCCACAATCTCTCAGGTGGTGGAAGAGATGAAGGAGCTGTGGGGCATGGCTCTACCTATCACAGCTATGAATATGTTGGTGTTTGTGAGGGCAGTGGTTTCTGTTCTCTTCTTGGGTAGGCTTGGAAGCCTAGAGCTAGCAGGTGGTGCACTTTCCATAGGCTTCACCAACATAACAGGGTACTCTGTTCTTGTGGGTCTTGCAGCAGGCCTAGAACCTGTGTGCAGCCAAGCCTATGGTAGCAAAAACTGGGACCTCCTCTCTCTATCTCTCCAACGCATGGTCCTCATCCTTCTCATGGCAATCATCCCCATAAGTCTTCTCTGGCTGAACCTTGAGAGGATCATGCTGTTCATGGGCCAAGACAGTGCCATAACAGGAATGGCATCAGTCTACTGTTTCTACTCTCTACCAGACCTTTTAACAAACACCTTGCTTCAACCTTTAAGGGTTTTTTTAAGGTCCCAAAAGGTGACCAAACCTATGATGTATTGCTCCCTTGTAGCAGTGTTGTTCCATGTGCCACTGAACTACTTGTTGGTGGTGGTGATGGAGCTGGGGGTGCCGGGGGTGGCCATGGCTTCAGTCCTGACCAATCTGAACATGGTGGTGCTTATGGCAGGGTATGTGTGTTTGTGCAGGAAGAAGGAGATGGTGTTTAAGTGGGGATGTGGAGGGGGAGTGGTGGCTGGGTTGTGTTCTGGGTTGGGGCAGTTGATGGAGTTTGCTGTGCCTAGTTGCCTTATGATATGTTTAGAGTGGTGGTGGTACGAGATTGTAACTGTTCTGGCTGGGTACTTGCCACGTCCAACACTGGCTGTGGCTGCCACTGGTATTTTGATTCAGACAACTAGCATGATGTACACTGTCCCCATGGCACTTGCAGGGTGTGTTTCTGCTAGGGTAGGGAATGAGCTTGGAGCTGGGAAACCATACAAGGCAAAACTAGCAGCAATGGTTGCCTTAGGATGTGCATTTGTGATAGGCTTCATCAATGTGATATGGACTGTGATATTAGGTCAAAGATGGGCCGGGCTTTTCACCAGTGATGACCCTGTCAATGTCTTGGTTGCCTCAGTGATGCCAATTATGGGCCTGTGTGAGCTTGGGAACTGCCCACAAACCACAGGCTGTGGGATTCTGCGGGGCACCGGCCGGCCCGGTGTGGGGGCCAATATAAATCTGGGCTCATTCTACTTTGTGGGCACTCCGGTGGCGGTCGGCCTGGCATTTTGGTTCAAGGTTGGTTTCAGTGGGCTTTGGTATGGGCTTCTGTCGGCCCAGGTGGCCTGTGCAGTATCAATCATGTATGTGGTGTTGGTGAAGACTGATTGGGAAGTTGAGGCCCTGAAGGCTGAAAAGCTCACAAGGGTGGAAATGAGTAGTAGTTGCAATGGGCTTAGGAGTAAGGAGAATGAGAAAAATGAGGAAATGAAAGGGTTGTTGGGAAATGGTAACAAGAAAGATGACATTTGCTAA 1521 0.4951 MGENKDQDFFSHKFPTISQVVEEMKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWDLLSLSLQRMVLILLMAIIPISLLWLNLERIMLFMGQDSAITGMASVYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVLFHVPLNYLLVVVMELGVPGVAMASVLTNLNMVVLMAGYVCLCRKKEMVFKWGCGGGVVAGLCSGLGQLMEFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVIGFINVIWTVILGQRWAGLFTSDDPVNVLVASVMPIMGLCELGNCPQTTGCGILRGTGRPGVGANINLGSFYFVGTPVAVGLAFWFKVGFSGLWYGLLSAQVACAVSIMYVVLVKTDWEVEALKAEKLTRVEMSSSCNGLRSKENEKNEEMKGLLGNGNKKDDIC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0915 506 CDD MATE_eukaryotic 23 465 IPR045069 GO:0042910|GO:1990961
Pvu4g0915 506 TIGRFAM matE: MATE efflux family protein 33 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g0915 506 Pfam MatE 259 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g0915 506 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g0915 506 MobiDBLite consensus disorder prediction 480 506 - -
Pvu4g0915 506 MobiDBLite consensus disorder prediction 483 506 - -
Pvu4g0915 506 PANTHER PROTEIN DETOXIFICATION 13 480 - -
Pvu4g0915 506 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0915 Pvu-Chr4 17534818 17538934 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0915 K03327 - gmx:100794753 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0915 4 17534818 17538934 Pvu4g0915 4 17534818 17538934 ECH