Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0826 ATGGCTCTTCTCATCATTTTTCACCTGCTTGCAATATTTGTACCTGCTTTGGGAGATGCTTTTATTGGTGTCAACATTGGTACAGATGTGACTAACATGCCAAGTCCAACAGAGGTTGTGACCCTTCTTAAGGCTCAAGGTATTCAACATGTTAGACTATATGATGCTGACAGAGCCATGCTTCGTGCACTTGCCAACACAGGAATCCGTGTAATTGTTTCTGTTCCCAATGACCAGCTTCTCGGCATTGGTCAGTCCAATGCCACCGCCGCCAATTGGGTTGCACGCAATGTCATTGCTCATGTCCCTGCTACCAACATTACTGCCATAGCAGTTGGTTCTGAAGTCCTAACATCACTCACCAATGCAGCTCCTGTCCTAGTCTCAGCACTAAAATTCCTTCAAGCTGCTCTAGTTGCAGCCAATCTTGATCAGCAAATCAAAGTCTCCACTCCACACTCTTCTTCTGTCATGGTTAACTCTTTCCCACCTTCTCAGGCATTTTTTAATAAATCTTGGGATCCTGTCATGGTTCCCTTGCTCAAATTTTTGCAATCAACAGGTTCATATCTTATGCTCAATGTGTACCCTTATTATGATTTCATGAAACCCGGTGCTGTAATCCCTCTAGACTATGCTTTGTTCCGGCCCTTGCCTCCAAATAAAGAAGCTATTGATTCCAACACCCTTCTGCATTATACTAATGTCTTTGATGCAGTTGTTGATGCTGCTTATTTTGCAATGTCATATTTGAACTTTACCAACATCCCTATTTTAGTTACCGAGTCAGGATGGCCCTCCAAAGGAGATTCGTCCGAGCCAGATGCAACTATTGATAATGCTAGCACTTACAATAGTAACTTGATCAGGCACGTCCTTAACAATAGTGGAACTCCTAAGCAACCTGGTATTGCAATTAGCAGTTATATTTATGAGCTTTATAATGAAGACTTGAGAACAGGTCCAGTGTCTGAGAATAACTGGGGGCTGTTTTATGCTAATGGAGCTCCAGTGTATACCTTGCACTTGACTAATGCTGGTACTGTATTTGCAAATGACACAACAAACCAAACCTTTTGTGTTGCCAAGAGTAATGCAGATACTAAGTTGCTTCAGGCTGCACTTGATTGGGCTTGTGGACCGGGGAAGGTGGATTGTTCGTCATTGCTGCAGGGTCAACCGTGTTATGATCCAAATAATGTAGCTGCACATGCTACATATGCTATCAATGCTTATTATCAGCAGATGGCTAAATCTGCTGGGACCTGTGATTTCAAAGGAGTTGCCTCTGTCACCACTACAAATCCAAGTCATGGTTCCTGTATATTTCCTGGAAGTTATGGAAAAAATGGTAGCAGCATAAATGGCACAGAACTGGCTCCATCTACCAATTCAACAAATTCAGGGTGCTTATCACAGTATTACAATGGTGGATCTTTAACAAGCTCTCTGATTCTTACTTTAATTTTGAGTGTAGCTGTCTTGTAA 1488 0.4227 MALLIIFHLLAIFVPALGDAFIGVNIGTDVTNMPSPTEVVTLLKAQGIQHVRLYDADRAMLRALANTGIRVIVSVPNDQLLGIGQSNATAANWVARNVIAHVPATNITAIAVGSEVLTSLTNAAPVLVSALKFLQAALVAANLDQQIKVSTPHSSSVMVNSFPPSQAFFNKSWDPVMVPLLKFLQSTGSYLMLNVYPYYDFMKPGAVIPLDYALFRPLPPNKEAIDSNTLLHYTNVFDAVVDAAYFAMSYLNFTNIPILVTESGWPSKGDSSEPDATIDNASTYNSNLIRHVLNNSGTPKQPGIAISSYIYELYNEDLRTGPVSENNWGLFYANGAPVYTLHLTNAGTVFANDTTNQTFCVAKSNADTKLLQAALDWACGPGKVDCSSLLQGQPCYDPNNVAAHATYAINAYYQQMAKSAGTCDFKGVASVTTTNPSHGSCIFPGSYGKNGSSINGTELAPSTNSTNSGCLSQYYNGGSLTSSLILTLILSVAVL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0826 495 Pfam X8 domain 359 429 IPR012946 -
Pvu4g0826 495 Gene3D - 352 444 - -
Pvu4g0826 495 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 486 IPR044965 GO:0004553|GO:0005975
Pvu4g0826 495 SMART X8_cls 358 443 IPR012946 -
Pvu4g0826 495 Gene3D Glycosidases 21 349 - -
Pvu4g0826 495 Pfam Glycosyl hydrolases family 17 22 342 IPR000490 GO:0004553|GO:0005975
Pvu4g0826 495 SUPERFAMILY (Trans)glycosidases 22 342 IPR017853 -
Pvu4g0826 495 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 6 486 - -
Pvu4g0826 495 ProSitePatterns Glycosyl hydrolases family 17 signature. 256 269 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0826 Pvu-Chr4 13021114 13026503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0826 19 437 Glycoside Hydrolase AT2G01630 76.372 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0826 K19891 - gmx:100810169 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0826 4 13021114 13026503 Pvu4g0826 4 13021114 13026503 ECH