Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0819 ATGCTGCACCATTTCAACATGAACATCTTGTTCACGATCCTTTTAGCTGTCACCACAGCATGTTTCTATGTCCCTGGGTTGAAACATCGAGGTTCCATCATAGTAGCATCATGCATGGCCATGGCAATGTTATACCACTTTCTAATAAACCGACCCTGCAATGTTTACTTGGTGAATTTTGCATGCTTCAAGCCAAGCATGGCGTGCCTTTGCTCGAAGGAAACGTTGCTGGACAGAGCAAAGCGCGTGGGGTTTCTTTCCGACGAGAACTACAAGCTCGTGAACAAGATTCTCGACAGGTCTGGGTTGGGACCGTGGACCTATGTTCCAGAGGGGTTGTTGGCGATTCCGCCGAAGCTAACGTTGGACGAGGCAAGGAAGGAAACAGACACGGTGCTCTTCGGAGCTGTTGATGAGCTTTTGGCGAAAACTGGGATTGAGGCGAAGGACATAGGGATTCTTGTGGTAAATTGTTGCTTGTTCAATCCCACACCGTCTCTGTCTGACTCCATTATCAATCGGTATAAGCTTCGAGGGAACATTTTGGCGTATAATCTCAGTGGCATGGGGTGCAGTGCAGGGGTTCTTGCTGTTGACTTTGCCAAACATCTCCTTCAGGCACACCCGAACTCGTACGCGCTGGTTCTGAGCACGGAAAATGAGATCTCGAGCATGTACTGGGGCAACAACCCCTCCATGCTGCTGGTGAACTGCCTCTTCCGAATGGGCGGGTCCGCCGCGCTCCTCTCCAGCCACCCGTCGGACCGTTGCCGCGCAAAGTACCAGCTCCTCCACACGCTCCGAACGCACGTCGGCGCCGACGAAAACAGCTACAGGTGTGTCTTCCAGGAGGAGGATGAGGAGAAGAAGGTGGGCGTGTCGCTCTCGAAAGAGCTGATGAACGTGGCACGCGACGCGCTGAAAGTGCACATCACCTCCCTGGGGCCCCTCGTCCTCCCACTCTCGGAGAAGATAAAGTTCTTGATAAACCTAATCGAGAGGAAGGTGCTGAAGACGAAGATCGAGTCCTACATGCCGAACTTCAAGCTTGCGTTCCAGCACTTCTGCATCCACACGGGAGGGAGGGCTGTGCTGGACCGCATGCAGAAGAGTTTGGAGCTCGAAGACTGGCACATGGAACCTTCTAGAATGACGCTGTACAGGTTCGGAAACACTTCTTCGAGCTCCGTGTGGTACGAGTTGGCGTATTGCGAGGCGAAGGGGAGGGTGAAGAAGGGTGATAGGGTGTGGCAGATGGCGTTTGGGTCGGGGTTCAAGTGCAACACTGCCGTCTGGCTTGCCTTGAACACCGTCGAAGCCGCGTCGTGCAGCAGCGCGTGGAGGGATGAGATTGGTAATTTTCCTGTCAAGATTGAACCTCTCCCCGTCAAGACTAACAAATAA 1404 0.5328 MLHHFNMNILFTILLAVTTACFYVPGLKHRGSIIVASCMAMAMLYHFLINRPCNVYLVNFACFKPSMACLCSKETLLDRAKRVGFLSDENYKLVNKILDRSGLGPWTYVPEGLLAIPPKLTLDEARKETDTVLFGAVDELLAKTGIEAKDIGILVVNCCLFNPTPSLSDSIINRYKLRGNILAYNLSGMGCSAGVLAVDFAKHLLQAHPNSYALVLSTENEISSMYWGNNPSMLLVNCLFRMGGSAALLSSHPSDRCRAKYQLLHTLRTHVGADENSYRCVFQEEDEEKKVGVSLSKELMNVARDALKVHITSLGPLVLPLSEKIKFLINLIERKVLKTKIESYMPNFKLAFQHFCIHTGGRAVLDRMQKSLELEDWHMEPSRMTLYRFGNTSSSSVWYELAYCEAKGRVKKGDRVWQMAFGSGFKCNTAVWLALNTVEAASCSSAWRDEIGNFPVKIEPLPVKTNK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0819 467 PANTHER 3-KETOACYL-COA SYNTHASE 4 459 - -
Pvu4g0819 467 PIRSF Very_long_ch_3-ktacl-CoA_syn 6 466 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu4g0819 467 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 353 432 IPR013747 -
Pvu4g0819 467 Pfam FAE1/Type III polyketide synthase-like protein 49 336 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu4g0819 467 SUPERFAMILY Thiolase-like 39 258 IPR016039 GO:0016746
Pvu4g0819 467 SUPERFAMILY Thiolase-like 264 432 IPR016039 GO:0016746
Pvu4g0819 467 PANTHER 3-KETOACYL-COA SYNTHASE 4 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu4g0819 467 CDD CHS_like 50 432 - -
Pvu4g0819 467 Gene3D - 111 433 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0819 Pvu-Chr4 12676541 12681887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0819 9 462 Miscellaneous Gene Families AT1G04220 56.809 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0819 K15397 - gmx:100803579 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0819 4 12676541 12681887 Pvu4g0819 4 12676541 12681887 ECH