Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0487 ATGTTTAGTAGCAGACTCTATCACTTTTGTGTGGCAACCATTTTATGCATCTTTTTATCTCATGCAAGTTTCCATGCAGAGATGTGTGCGGAGATAGAGAAGCAAGCTCTTCTCAAGTTGAAGGAAGGTTTTGTTCATGAAACGGAGCTTCTATCCTCCTGGAACGGTGATGATTGTTGCAAATGGAAAGGAGTTTCATGCAATAATTTAACAGGTCATGTAACCTCACTTCATCTCACATTTTCAAATTTTACAAAAGTTGAAGATTTAAACTATCTTGTGGACACAATGCCAGTGATGGAATTTTTCAGTGGCCCTAGAGCATTGGGAGGTAGGATAGATTCTTCAATATGTGAACTGCAGCATCTCAGTTTCTTAGATCTCAGTCATAATGACTTAGTGGGAGAGATCCCAAAATGCATTGGTTCACTTGGTCAATTGACACATCTAAAACTTGCATGGAATGGTCTTAATTCCGTTTCAGATGCTTTGTCAAATCTTTCCAATTTGCAATATCTTGACCTTGAGAAAAATGATTTTGTTGCAAGTGACCTTAATTGGCTTTCTCACCTTTCTACTTTGAGATACCTTGATCTTTCAAATAACAATCTTGGTGCAGTTATTGATTGGCCATCATCAATAAGTAAAATCCCTTTTCTATCTGAACTCTATTTAAATGATTGTAGACTCCCTCAAGTCAATCCTAAATCAATCTCCCACATCAATTCTTCCACTTTCCTCCAAATCCTCAGTCTATCAGGAAATAATTTTGACTCTTCAATTCTGTCATGGGTGTTGAATGTTAGCAAAGTCCTCACAGTTCTTGATCTCTCACATAATGAACTTGATGGTAGCATAATAATGTCCTTTAACTCTTTGTGTCAACTTAAGAAGTTGTACCTGGGTTCCAATAAATTGTCTGATCAACTCAGTGATTACTTACCAGAATTTTGTTCTGCAAAAGATTTAGAGGTGTTGAATCTCGACCACAACTCATTTGTTAATGGGTCACTTCCTGATTTTTCAATGTTTTCATCCTTGGAAAGACTATCACTTCAAAATACCAGTATTGTTGGGCCATTATCATTTGGTCACTTGCCTCGTCTTAAAGCTTTGGATCTTAGTTTAAACTATTTGAGTGGATCATTGCCTGTATTCGAGGTTACTAAATTTTCCTCATTGCATTTTTTGGATCTTTCACACAACAAATTGAGTGGGACACTTCCATATACTATTGGACAACTTTCTAATCTCTGGTTTTTGTCCATCTCCTCAAATGAGTTGAATGGGAACATTAGTGAAGAGCATTTATTGAAACTATCTGGATTGAAGATACTTGATGTGAGTCAAAATTCTCTTTCATTTAACTTGAATTCAGATTGGGTTCCACCTTTCCAACTGGTGGGATTGTATGCATCATCCTGCATTTTGGGGCCTCAATTTCCAATGTGGCTTAAACAGCAAAGGAAACTTCAGGTTCTGCAAATCTCTAATACCCACATTATGGATGTATTTCCTGAATGGTTTGGGGACATATCATCAAGTTTGTTATACATAAATGTTTCCCGTAATAAACTTAGTGGAGTCTTACCAAAATCATTATCTGGTATTAAAACAGGGATTCTGAGTACATGGGATTTTAGTTTCAACAATTTGTCTGGCCCATTGCCTCCTTTTCCTCCAAAAGTATATGAACTCTTTCTCTCAAATAATATGTTCAGAGGGTTTGTATCCTCCTTTTGTGAAACATCCCCACTGTCTGTAACTTATCTTGACCTCTCTAGTAACGCACTCACAGGCCCCCTTCCAAATTGTTGGCAGAAATTTCAAAATTTGGAGGTTCTGAATTTGGCAAATAACAGTTTATCAGGGAGAGTGCCAGAGTCATTGGGCAATTTACAAAGGATTTCGGCAATGCATCTAAATAGCAATAACTTCTCCGGTGAGATTCCATCTCTGACTCTTTGTAAAAGTAGCTTAAGATTCGTTGATTTTGGGGATAATAATCTTGAAGAAACATTGAAAACATTGTTAGAGTTGGATCATTTGGTTGTATTACGTCTACGAGGTAACAGGATCCGAGGAAGCATACCCACCAGTCTATGTAATATATTATCTCTTCAAGTATTGGATCTCTCATCAAACAACATTACAGGGGAAATACCACAATGCATCGGTGACATAAGTGCTATGTCAGATAATGGATTTGAAGATGAAACCATTTTCTATGGAACGTCTGCACCTTTAATATTTCATGACAGTGGAATTGGGTTTTTTAGTGATAAATTATCATTGACATGGAAAGGAAGAAACTCTGAATTTCGGAGATTTTTTGGATTTTTAAAAGCCATTGATATTTCTAATAACCATTTAACAGGAGAGATACCGCAAAGTATAACATCACTAGTGGGTTTATTCTTCTTAAATCTTTCAAGAAATAATCTTACAGCATTCATTCCCGACAGCTTTGGTCGTTTGGTGAACTTGGAATCACTTGACTTGTCAAGAAACCATCTTCATGGTAGAATTCCATCAAGCTTTTCACAATTGCATTTTCTCATGGTCTTGAACTTGTCTTTCAACAACTTAACAGGATTGGTTCCTGTAGGCCCCCAACTAGACACCTTTGATAACTCTTCGTATGTTGAGAACATCGGGCTTTGTGGCTTGCCACTCGAAAACCAATGCCCAGGAGATGTGATTCCACCAAGAGGAAGAGTTGAAAAAAATGAGGATAAAGTCTTAAGCTTTGAGTTTTATCTCAGTCTGGGGTTGGGATTTTGTGTTGGATTTTGTAGTGTTTGTGGAACTTTAATCGTAAAAAGTTCATGGAGACGTGCTTATTTTCAGTTGTTCATCACCGTAAGCGATTGGATGTATGTGATTGTTGTTGTCTTTATAGCCAGAATGAAAAGAAGATTCCGAATTTGA 2931 0.3702 MFSSRLYHFCVATILCIFLSHASFHAEMCAEIEKQALLKLKEGFVHETELLSSWNGDDCCKWKGVSCNNLTGHVTSLHLTFSNFTKVEDLNYLVDTMPVMEFFSGPRALGGRIDSSICELQHLSFLDLSHNDLVGEIPKCIGSLGQLTHLKLAWNGLNSVSDALSNLSNLQYLDLEKNDFVASDLNWLSHLSTLRYLDLSNNNLGAVIDWPSSISKIPFLSELYLNDCRLPQVNPKSISHINSSTFLQILSLSGNNFDSSILSWVLNVSKVLTVLDLSHNELDGSIIMSFNSLCQLKKLYLGSNKLSDQLSDYLPEFCSAKDLEVLNLDHNSFVNGSLPDFSMFSSLERLSLQNTSIVGPLSFGHLPRLKALDLSLNYLSGSLPVFEVTKFSSLHFLDLSHNKLSGTLPYTIGQLSNLWFLSISSNELNGNISEEHLLKLSGLKILDVSQNSLSFNLNSDWVPPFQLVGLYASSCILGPQFPMWLKQQRKLQVLQISNTHIMDVFPEWFGDISSSLLYINVSRNKLSGVLPKSLSGIKTGILSTWDFSFNNLSGPLPPFPPKVYELFLSNNMFRGFVSSFCETSPLSVTYLDLSSNALTGPLPNCWQKFQNLEVLNLANNSLSGRVPESLGNLQRISAMHLNSNNFSGEIPSLTLCKSSLRFVDFGDNNLEETLKTLLELDHLVVLRLRGNRIRGSIPTSLCNILSLQVLDLSSNNITGEIPQCIGDISAMSDNGFEDETIFYGTSAPLIFHDSGIGFFSDKLSLTWKGRNSEFRRFFGFLKAIDISNNHLTGEIPQSITSLVGLFFLNLSRNNLTAFIPDSFGRLVNLESLDLSRNHLHGRIPSSFSQLHFLMVLNLSFNNLTGLVPVGPQLDTFDNSSYVENIGLCGLPLENQCPGDVIPPRGRVEKNEDKVLSFEFYLSLGLGFCVGFCSVCGTLIVKSSWRRAYFQLFITVSDWMYVIVVVFIARMKRRFRI* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0487 976 Pfam Leucine rich repeat 489 537 IPR001611 GO:0005515
Pvu4g0487 976 Pfam Leucine rich repeat 781 839 IPR001611 GO:0005515
Pvu4g0487 976 SMART LRR_sd22_2 269 292 - -
Pvu4g0487 976 SMART LRR_sd22_2 144 169 - -
Pvu4g0487 976 SMART LRR_sd22_2 585 614 - -
Pvu4g0487 976 SMART LRR_sd22_2 191 219 - -
Pvu4g0487 976 SMART LRR_sd22_2 440 459 - -
Pvu4g0487 976 SMART LRR_sd22_2 293 316 - -
Pvu4g0487 976 SMART LRR_sd22_2 826 852 - -
Pvu4g0487 976 SMART LRR_sd22_2 680 706 - -
Pvu4g0487 976 Pfam Leucine Rich repeat 271 289 IPR001611 GO:0005515
Pvu4g0487 976 Pfam Leucine Rich repeat 190 206 IPR001611 GO:0005515
Pvu4g0487 976 Pfam Leucine Rich repeat 706 720 IPR001611 GO:0005515
Pvu4g0487 976 Pfam Leucine Rich Repeat 611 633 IPR001611 GO:0005515
Pvu4g0487 976 Gene3D Ribonuclease Inhibitor 235 558 IPR032675 -
Pvu4g0487 976 PRINTS Leucine-rich repeat signature 394 407 - -
Pvu4g0487 976 PRINTS Leucine-rich repeat signature 826 839 - -
Pvu4g0487 976 SUPERFAMILY L domain-like 314 574 - -
Pvu4g0487 976 SUPERFAMILY L domain-like 545 893 - -
Pvu4g0487 976 SUPERFAMILY L domain-like 28 308 - -
Pvu4g0487 976 Gene3D Ribonuclease Inhibitor 29 230 IPR032675 -
Pvu4g0487 976 Pfam Leucine rich repeat N-terminal domain 33 68 IPR013210 -
Pvu4g0487 976 Gene3D Ribonuclease Inhibitor 559 900 IPR032675 -
Pvu4g0487 976 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 25 382 - -
Pvu4g0487 976 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 372 972 - -
Pvu4g0487 976 PANTHER LRR RECEPTOR-LIKE KINASE 372 972 - -
Pvu4g0487 976 PANTHER LRR RECEPTOR-LIKE KINASE 25 382 - -
Pvu4g0487 976 SMART LRR_typ_2 391 415 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 293 317 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 680 703 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 191 213 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 167 190 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 802 825 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 609 633 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 144 166 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 120 143 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 704 728 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 826 849 IPR003591 -
Pvu4g0487 976 SMART LRR_typ_2 850 873 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0487 Pvu-Chr4 5047070 5050384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0487 6 898 Receptor kinase-like Gene Family AT4G13920 31.407 3.32e-85 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0487 - - vun:114181765 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0487 4 5047070 5050384 Pvu4g0487 4 5047070 5050384 ECH