LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g3043	ATGTTCCCCTGGCGGAATTTTGCCAAATCCGCCGAGGCCACCTTCTCGCGCTGGGCTCTCAAGAGGGTTTGCAAGTTCTTCCTCAAGAAGAAACTTGGCCAGTTCATTCTCGGCGACCTTGACCTCGACCAGCTCGACGTGCAGCTCTCTCAGGGAACAATTCAGCTCTCCGATCTCGCTCTCAATGTCGATTTCGTCAACGCCAAGTTTGGTAAGACATCATCCATAATGATCAAAGAAGGTTCAATTGGCTACCTGTTGATTAAAATGCCATGGAGTGGTAAAGGTTGTGAGGTTGAAGTGAATGGGCTTGAATTGGTAGTTTCTCCGTGCTCAGATAAAGTGTCAACAAGTGAAGATGTAACTTGTAGCATGGATAATAGTGATAATCATCACCACAGATACAGCTCAACGATGACTGAGCACGAAATATCAGATGATGCTGAGAAGTTGGCTTCCATGGATGTTCACGAAGGTGTGAAAACTATAGCAAAAATGATAAAGTGGTTGCTCACAAGCTTCCATGTTACAGTAAAAAATGTAATTGTTGCATTTGATCCATCTTTAGATAAAGTAGAAAATAAGACATATCGTCGTCATGCCTTAGTTCTTCAGATTTCTGAAATACAATGTGGAACTAGTCTGTCTGAAGATGCTGATTTGAATGTTGATGTCCTTGGAATAAGCCAGTTAACAAACTTTGTAAAGTTTCATGGAGCAGTTATTGAGCTTCTCCAAATAGATAATGAGGATTTTTACTTTCAGCATGAATCAAGGGCAGGATGTGATGAACCTGTTTTGGGGTCAAATATAGAAACATGTCCAGTCTTGACTGGGAACAAAGGTGGATTTAGTGGAAGTATAAAATTAAGTATTCCTTGGAAGAATGGCTCCTTGGACATTTGCAAGGTGGATGCTGATGCTTGTGTTGATCCCATAGTGTTAAGATTTCAGCCTAGCTCTATTAAATGGCTATTGCAATCATGGGAAACTCTTAAGAATCTGAACAAGGATGGCAAAGGTTGCACAAATCACAACATAAGAGGACCTGCCCAGTTAAATTCTACATTGTTACGTCATTCATCAACTTCAGTTTCTATTACCAATGCTCCCAGTGAGAGTATAACTGCTGGCGGTAGTTTGTCAGCTGAATACGCTTCTATGATCCAACCTGAAACCCTTGCTGAAGATTTACTTCCTGCGGCTAATCTTATATCCGATTGGGTACCATTATCTGCAGACACAAATCATAATAAAGATGGTATTCAAGAACTTGATTTTGGGGCAAGTGTGGACCAGTTTTTTGAATGTTTTGATGGAATGAGAAATTCGCAATCAGCTTTAGGAAACAGTGGAATGTGGAATTGGACATATTCAGTTTTTAGTGCTATTACTGCTGCATCCAGCCTTGCTTCTGGATCTTTGCATATTCCATCTGAACATCAACATATGGAAACCAATTTCAGGGCAACTTTTGCTGGAGTATCAGTTGTTTTGTCTAGCTGTGTTGATGAACAGAATACAGTTTCTGATACTGAAATTGATCACATGGCTGGGTTACAAATTGATTATCTTGGTGCAGAGTGCAATGACATTGTTTTTGCATTGCAGGTATGCCCTCAAGGCATGACTCTTGATGCAAAGGTGAGGCATGTAGAAGTTGCTAATTTTGTGAACATTGGAATTGATGCTAAAAATCAAACTGCTTTGGTTCAACACCTACAAGCTAAGGTCCTTGATGCTCTCCCTTCGTCTACCTCTTACAATATAGATTCACATTCATTAATTGGGCCTGTTGCGACAGATTTTCCATTTGGAAATAATGATTGTTTGTTGAAAGTTACACTGTTTAGAACTTCTGGTGTCACGAATTGCCAATTTTCAATGCAATCAATTTCATCTGATGGTTGCCTGACAGGAAAGACATCATTCTCACTGAACTTGCCCCCATTTATTTTTTGGGTTATCTTTTCAGTAATTAATGTGCTCATGAATCTGCTAAAGGAAGTTGATAAATCACTTGGGATGCATAATAAAGAAAATATAATTCTATCTGAAGAATCAGATAACAAGTGTGGACCGTCTCAGAGTAATATGAAGGAAGGTTCTAGTCCCTGTGTGACATCTTTCTCCACAACACAATGCTTGCACGGTGATATATCAATTTCTAATGCAAGAGTGATATTGTGTTTTCCTTTCGGAAGGGACGAAGATTATAACAATTCATTTCCCTGGGAACAGTTCTTTGCTCTTGATTTTACTTCACTGTCACCTTTGAACAATGGTAGCACTCCAGATTATAGTCAAAGTTCAAATGCAAGTTCGAATAAAAGATTTCCTTCTGTATCTGCCCAATCTCTTCAACTGAGTTTCTGTGATCTTGACATCTACTTGATCACATCAAGTAATGAGAATGGTGGAATCATATCCTATGATGCGCAGAATGAGAAATTTTCTGCTAGCTGCTTCTTTTCTATATTTCATAGAAGAGGATGTTTCTCTGTTTTTCGTGTTGTTTGGCAAGGGGGTAAAGTGACTGGTCCTTGGATTGCTAAGAAAGCCAGATTATTTGCTAATTCAGAGGAAAGTAGGGGCAAAGAGGACACTGGAAGAAGGGGGCACGAGTTTGTGTCTGCATCAACAGTGAAAGATCTGGAAGATTGGAAATCTCAAACTCAACAAGAGATGATTTTAAGCTCATCGTTTCTCATACATGTCCATCTATCTCAACTTGTGATTAACGTGAATTATTCTCAATATAAAGGCATACATGATCTTCTACATCAGACATTGAATGCATTGACATGTGTGACTTCTAAGGAAGCCAATGTTGAAAAGGAATCTTCTGTCTCACAATCATCAGTATTTTTGGAATGTGATTCTCTTGAAATTCTTATTGATAGGGATACATCTGAGAGAACCAAAAGTTCAATCAAGAGTGAACTTCCTGGAATTTGGTGTCAGTTCAGGCTGAAAGTTCAAAAGTTTGAGGTGCTGTCGGTGACCAATACTGGCGGCATTAAGGCTGCAAGTTTCTTCCGATTAGCTCATGGTGAAGGCAAGTTGTGGGGGTTTGTCACTGGACTTCCTGATCATGAGTTTCTTCTGATTACTTGTAGCAACTCCTCTGTGAAAAGAGGTGATGGAGGAGGTTCTAATGCATTATCTTCCAAATGTGCTGGTTCTGAAGTCATTTGTCTCTCTGACCCCGAGATTTCTGACACTGTAACATCCATTACTGTCAGTTGTGGTACGATTATTGCTGTAGGTGGTCGTTTGGATTGGTTTGATGCAATTTCATCCTTTTTCTGTTTGCCTGCTTCTAATACCAAAGGGGTAGGAGATACTAGTATTTCAAAGAAGGAACATAATGTCTCTTACACAACTTCTTTTGTTCTGTGCTTGATTGATATTGCTTTGAGCTATGAGCCTTATGTGAAGAATCCTGTAGTTCAGAGTGAACTGAATTCAGAGTCTAGCTGTTCACTTAATGAAGATATGAGTGAACAATGTGTTTCCTGTTTGTTGGCTGCATCCAGCTTAACTCTTTCAAATTCATCTTCAGAAGACACAGTTGGAAGTGTTTTCCAAATCCGAGTGCATGACTTGGGGCTTCTACTTCATTTAATATCAGAATTGAATTCTGTGTCTGGCATTTATAGTGTTGAACATCTTCAAAAAACTGGTTATGTTAAAGTTGCTCAGGAGGCTTTTATGGAGGCGATTTTGAAAACAAACTGTACAAGTAGTCTTCTCTGGGAACTGGAATTATCTAAATCTCACCTTAATGTGGAAACATGCTATGACACAACTGCTGGTCTGATTCGTTTGGCTGCCCAACTTCAGCAATTATTTGCTCCTGATGTGGAGGAATCTATTGTGCATTTGCAGAATAGGTGGCATAACGTTCAACAGGCACAACAAAGGAATGAATTTAAAATTGAAAATAAGAATCTTAGATTTGACTCTATGTCTACAATTTCTGAACAATGCTCCCCTCCAACATTTTCAACGGATGGATCTAGTATAGCTGGCTGGATGGATGAAATATGTGAAGATGCATTTAAAGTAAATAACAATAATGCATCCCAATCTTATCCTTTTGGATCAGGGATTCCACTTGACGGAAGCTTAATCGAGGTTGGTCAGATGAATTTCCATAAGCCTGAAATTCTCTCTCATGAATTAACTTTGACTGAGCCAGTGAGTGTGCTAGGACCAGAAGGTAGCGATACTTCATTTCTGCAAGAGGGTTGTTTTCCAGAGGTTATAGAAAGCTATTGTTTGTCTGACTTATGCCCTCTGTCGGAGCTATCTTTAGGTATTCATTGTGATGAGCTTTCTAGACACAAACTGAGGAATGTGGAACATAAAGAGATTGAAAGAGGAAGTGGTAGATGGTATGGAGGCACCTCTCTGAAAGTATTAGAAAACCACATTGCAGAGGAAAGCAAACAATCTGAACTGGAAAAGGCTGTAGATCATCGAGGCATGCTTTTATCTGACGATAGCTCATCACATGGTGAAACTTGTGGACGAGTAATTCTGAAGAGAATTGATATAAGATGGAGAATGTATGGTGGTTCTGACTGGCTTGACTCTGAGAAAAGTGGGCAGTATTCTGGGAGAGACACATCTATTTGCTTGGAACTTGCATTATCTGGGATAAAATTTCAGTATGACATATTTCCAGTTGGTGGACTACATGTATCTAAGATGCATGTGTCTGTTCAAGATTTTTATCTCTATGACAGAAGCCATGATGCACCTTGGAAACTGGTATTAGGATATTATCACTCAAAAGGTCATCCTAGGGAATCATTTTCAAAAGCATTTAAATTGGACTTGGATGCAGTTAGACCAGATCCTCTTACTCCCCTTGAGGAGTACAGGTTAAATGTTGCTATTTTACCTTTGTTGTTACATCTCCATCAATGCCAGCTTGATTTTTTTGTTGACTTCTTTGGGAGAAAAAACACATTGAAGGATCAGTTTTCTAATAGTTGTCAAGATTTTGAGGGTTCAAAATCATTGCCCGAGAAGACTAAGAAAAATAAAGATTGTGTATTTCATTCAATTGCACCAGAGGCGCTGCTTCCCTACTTCCAGAAGCTAGATATATGGCCTATTCTTGTTCGGGTGGATTACAGTCCGAGTCGTGTAGATCTAGCAGCTTTAAGGCATGGAAAGTATGTAGAGCTTGTCAATCTTGTCCCGTGGAAGGGGGTCGAGCTTAACCTGAAACATGTTCATGCTTCTGGCGTCTACGGTTGGGCCAGTGTTTGTGAAATTACTGCAGGGGATTGGTTGGAAGATATATCTCAGAATCAAATTCATAAAATACTCCGGGGGCTTCCTACTGTGCGATCATTGATTGCAGTTGGGGCTGGTGCTGCTAAGCTGGTTTCATCACCAGTAGAGAGCTACAAGAAGGAGCGGAGAGTGCTCAAGGGTGTGCAGAGAGGTACAATTGCATTTCTTCGAAGCATTTCTCTTGAAGCTGTTGGACTTGGAGTTCATCTAGCTGCCGGAGCCCATGACATTCTCCTCCAAGCAGAATATATTCTTTCAAGCATACCTTCTCCAGTTCCACTGCCTGTGAAAGACAAATCAAAAACAGATGTTCGATCCAATCAACCTAAAGATGCCCAAGAAGGAATTCAACAGGCTTATGAGAGTCTTAGTGATGGCTTGGGAAAATCTGCTGCTGTGTTAGTTCAGAGCCCCTTAAAAAAATTTCAGAGAGGTTCAGGTGCTGGACCTGCCTTGGCTGCTGCTGTTCGAGCAGTTCCTGCTGCTGCCATAGCCCCCGCTTCAGCTTGTGCTAGTGCTGTACACTGTGCTCTTCTTGGATTCAGAAATAGCCTAGATCCAGAACGTAAAAAGGAATCCATGGAGAAATATTGTCCAGCACAACCCTGGGAAGAAGACTGA	5934	0.4029	MFPWRNFAKSAEATFSRWALKRVCKFFLKKKLGQFILGDLDLDQLDVQLSQGTIQLSDLALNVDFVNAKFGKTSSIMIKEGSIGYLLIKMPWSGKGCEVEVNGLELVVSPCSDKVSTSEDVTCSMDNSDNHHHRYSSTMTEHEISDDAEKLASMDVHEGVKTIAKMIKWLLTSFHVTVKNVIVAFDPSLDKVENKTYRRHALVLQISEIQCGTSLSEDADLNVDVLGISQLTNFVKFHGAVIELLQIDNEDFYFQHESRAGCDEPVLGSNIETCPVLTGNKGGFSGSIKLSIPWKNGSLDICKVDADACVDPIVLRFQPSSIKWLLQSWETLKNLNKDGKGCTNHNIRGPAQLNSTLLRHSSTSVSITNAPSESITAGGSLSAEYASMIQPETLAEDLLPAANLISDWVPLSADTNHNKDGIQELDFGASVDQFFECFDGMRNSQSALGNSGMWNWTYSVFSAITAASSLASGSLHIPSEHQHMETNFRATFAGVSVVLSSCVDEQNTVSDTEIDHMAGLQIDYLGAECNDIVFALQVCPQGMTLDAKVRHVEVANFVNIGIDAKNQTALVQHLQAKVLDALPSSTSYNIDSHSLIGPVATDFPFGNNDCLLKVTLFRTSGVTNCQFSMQSISSDGCLTGKTSFSLNLPPFIFWVIFSVINVLMNLLKEVDKSLGMHNKENIILSEESDNKCGPSQSNMKEGSSPCVTSFSTTQCLHGDISISNARVILCFPFGRDEDYNNSFPWEQFFALDFTSLSPLNNGSTPDYSQSSNASSNKRFPSVSAQSLQLSFCDLDIYLITSSNENGGIISYDAQNEKFSASCFFSIFHRRGCFSVFRVVWQGGKVTGPWIAKKARLFANSEESRGKEDTGRRGHEFVSASTVKDLEDWKSQTQQEMILSSSFLIHVHLSQLVINVNYSQYKGIHDLLHQTLNALTCVTSKEANVEKESSVSQSSVFLECDSLEILIDRDTSERTKSSIKSELPGIWCQFRLKVQKFEVLSVTNTGGIKAASFFRLAHGEGKLWGFVTGLPDHEFLLITCSNSSVKRGDGGGSNALSSKCAGSEVICLSDPEISDTVTSITVSCGTIIAVGGRLDWFDAISSFFCLPASNTKGVGDTSISKKEHNVSYTTSFVLCLIDIALSYEPYVKNPVVQSELNSESSCSLNEDMSEQCVSCLLAASSLTLSNSSSEDTVGSVFQIRVHDLGLLLHLISELNSVSGIYSVEHLQKTGYVKVAQEAFMEAILKTNCTSSLLWELELSKSHLNVETCYDTTAGLIRLAAQLQQLFAPDVEESIVHLQNRWHNVQQAQQRNEFKIENKNLRFDSMSTISEQCSPPTFSTDGSSIAGWMDEICEDAFKVNNNNASQSYPFGSGIPLDGSLIEVGQMNFHKPEILSHELTLTEPVSVLGPEGSDTSFLQEGCFPEVIESYCLSDLCPLSELSLGIHCDELSRHKLRNVEHKEIERGSGRWYGGTSLKVLENHIAEESKQSELEKAVDHRGMLLSDDSSSHGETCGRVILKRIDIRWRMYGGSDWLDSEKSGQYSGRDTSICLELALSGIKFQYDIFPVGGLHVSKMHVSVQDFYLYDRSHDAPWKLVLGYYHSKGHPRESFSKAFKLDLDAVRPDPLTPLEEYRLNVAILPLLLHLHQCQLDFFVDFFGRKNTLKDQFSNSCQDFEGSKSLPEKTKKNKDCVFHSIAPEALLPYFQKLDIWPILVRVDYSPSRVDLAALRHGKYVELVNLVPWKGVELNLKHVHASGVYGWASVCEITAGDWLEDISQNQIHKILRGLPTVRSLIAVGAGAAKLVSSPVESYKKERRVLKGVQRGTIAFLRSISLEAVGLGVHLAAGAHDILLQAEYILSSIPSPVPLPVKDKSKTDVRSNQPKDAQEGIQQAYESLSDGLGKSAAVLVQSPLKKFQRGSGAGPALAAAVRAVPAAAIAPASACASAVHCALLGFRNSLDPERKKESMEKYCPAQPWEED*	1978

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g3043	1977	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	15	1968	IPR026849	GO:0006914
	Pvu3g3043	1977	Pfam	Autophagy-related protein 2 CAD motif	1217	1288	IPR026885	-
	Pvu3g3043	1977	Pfam	N-terminal region of Chorein or VPS13	20	120	IPR026854	-
	Pvu3g3043	1977	Pfam	Autophagy-related protein C terminal domain	1875	1968	IPR015412	-
	Pvu3g3043	1977	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	15	1968	IPR026886	GO:0006914\|GO:0030242

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g3043	K17906		-	gmx:100805552	3318.48

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu3g3043	3	52098694	52109253	Pvu3g3043	3	52098694	52109253	ECH