Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3008 ATGGATTTCCTCTGGACCGAGAATGCGACGCCGCACGCCTCGCAATTCTCCGCCGCGATCTACTTCGCCTTCGCCAGTTTCGCGGCCAGGTTCTTCCTTGACAGATTCGTTTTTCGCAGGTTGTCTATTAGGATGTTGACAAAGGGTAGAGCTCCATCACGTATTACTAAGGAAATGGAAGTAAAGATTGGAAAATGCTCAGAGTCAATGTGGAAGTTAACATATTATGCTGCTGTTGAAGCATTCATTCTTAAAATTTCCTACCAGGAACCCTGGTTCAGTAATACGAAATTATACTTCAATGACTGGCCAAATCATGAGTTGAAGAGTTCTATGGTGTTGTACTACATGTGCCAGTGTGGGTTCTACATATATAGTATTGTTGCTATTTTGACATGGGAGACTAGAAGGAAGGATTTTTCGGTGATGTTTACCCACCATGTAATTACTGTTTTACTAATTGGGTGCTCGTATTTAACAAGTTTTTTTAGGATTGGCTCCATAATCCTCGCCCTTCATGATGCAAGTGATGTGTTCATGGAAGCTGCAAAGGTTTTCAAGTATTCTGGAAGGGAGTTTGCTGCAAGTGTGTGTTTTGGATTCTTTGCAGTTTCATGGCTCATATTGCGGCTAATTTTCTTTCCCTTTTGGGTTATTAAAGCGACAAGCATTGATCTTCAACAGTGCCTAAACCTGTCAGAAGGTTTTGACATGTTTCTCTACTACATTTTTAATACAATGCTCATAATGCTACTCATCTTCCATATATACTGGTGGAAGCTCATATGTGCAATGATCTATAGACAGCTGAAAAATAGGGGAAAAGTTGGCGAGGATATAAGATCTGATTCAGACGATGATTGA 864 0.4062 MDFLWTENATPHASQFSAAIYFAFASFAARFFLDRFVFRRLSIRMLTKGRAPSRITKEMEVKIGKCSESMWKLTYYAAVEAFILKISYQEPWFSNTKLYFNDWPNHELKSSMVLYYMCQCGFYIYSIVAILTWETRRKDFSVMFTHHVITVLLIGCSYLTSFFRIGSIILALHDASDVFMEAAKVFKYSGREFAASVCFGFFAVSWLILRLIFFPFWVIKATSIDLQQCLNLSEGFDMFLYYIFNTMLIMLLIFHIYWWKLICAMIYRQLKNRGKVGEDIRSDSDDD* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3008 287 PIRSF LAG1_LAC1 3 287 IPR016439 GO:0046513|GO:0050291
Pvu3g3008 287 ProSiteProfiles TLC domain profile. 64 271 IPR006634 GO:0016021
Pvu3g3008 287 SMART lag1_27 64 271 IPR006634 GO:0016021
Pvu3g3008 287 Pfam TLC domain 65 263 IPR006634 GO:0016021
Pvu3g3008 287 PANTHER BNAA01G26210D PROTEIN 10 284 - -
Pvu3g3008 287 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 10 284 IPR016439 GO:0046513|GO:0050291
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g3008 Pvu-Chr3 51822079 51827389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3008 - - ccaj:109801348 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g3008 3 51822079 51827389 Pvu3g3008 3 51822079 51827389 ECH