Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3002 ATGTCGTTGCTGCTACTGCCTCAACCGTCCACCACCCTCTCTCCGGTCACCGCCTCTGCCGCCGCCGCACGCATACCCTTCGCCGCCGTCAAGCCTCGGAGGCAGAGAGCGCTCACTCCGAAAGCCACACTCTCAATCTCTCCCCCAGCTACAGCACCCAATGCAATCCCTCCGAAGAAGGTTCTGGTTCCCATCGGTTTGGGCACCGAAGAAATGGAAGCCGTTATCATGATTCACGTCCTGCGACGCGCCGGCGCGGAAGTCACCGTCGCCTCCGTGGAGCCGCTGCTCCAAGTAGAAGCCGCCGGAGGCACCAAAATAGTCGCCGACACCGACATTTCCGCGTGTTCCGATCAAATTTTTGACCTCGTTGCTTTACCCGGAGGAATGCCTGGCTCTGCAAGACTACGGGATTGCGAAGTTCTGCGAAAAATCACTAGCAAACAAGCTGAGGAAAATAGGCTCTATGGAGCTATTTGTGCTGCTCCCGCTGTCACCCTTTTGCCATGGGGTCTTTTGAAGAAGAAGAAGATAACTTGTCACCCCGCATTCTTCGACAGCCTTCCAACCTTTTGGGCAGTTAAATCAAATCTTCAGGTTTCCAGAGGACTCACAACCAGCCCGGGGCCTGGAACAACATACCAGTTTGCTTTGTCCTTGGCCGAGCAGCTATTTGGGGAGTCTGTTGCTAGGGAGGTCGCAGAATTGTTGTTGATTAGAACGGATGATGATAATGCAACTAAGGAGTTCAATAAAGTTGAATGGTCTATTGGCCATCACACCCCTAGTGTCCTCATACCAATTGCACATGGTTCGGAAGAGATTGATGTAGTGACTGTGGTAGATATTCTAAGGCGAGCAAAAGCTAATGTCATAGTTGCTTCAGTTGAGAAATCTCTTGAAGTTTTGGCTTCACAAGGAACGAAAATTGTTGCTGATATATTAATTAGGGATGCTCAGGAGTCAACACATGATTTGATTATTCTTCCAGGAGGAACTACTGGTACCCAAAAACTAAGCAAATCAAGAATTCTGAAGAAGCTTCTTAAAGAACAAAATTCAACTGGAAGAATATATGGGGCGATCTGTTCTTCACTTGCTATTCTACACAAACAAGGTTTACTCAAGGACAAGAGGGCCACAGCCCATCCCTCTGTCTCAGACAAGGTTAATGACGAAGCAATAAATGGGGCCAAAGTAGTTATTGATGGAAATTTGATCACTAGTGAGGGGCTTGCCACTGCAACATATTTTGCACTGGCCATTGTGAGCAAGCTATTTGGCAATGGAAGAGCTAGAAGTGTAGCAAAAGGCCTTGTTTTTGAGTATCCTAAGTAG 1338 0.4821 MSLLLLPQPSTTLSPVTASAAAARIPFAAVKPRRQRALTPKATLSISPPATAPNAIPPKKVLVPIGLGTEEMEAVIMIHVLRRAGAEVTVASVEPLLQVEAAGGTKIVADTDISACSDQIFDLVALPGGMPGSARLRDCEVLRKITSKQAEENRLYGAICAAPAVTLLPWGLLKKKKITCHPAFFDSLPTFWAVKSNLQVSRGLTTSPGPGTTYQFALSLAEQLFGESVAREVAELLLIRTDDDNATKEFNKVEWSIGHHTPSVLIPIAHGSEEIDVVTVVDILRRAKANVIVASVEKSLEVLASQGTKIVADILIRDAQESTHDLIILPGGTTGTQKLSKSRILKKLLKEQNSTGRIYGAICSSLAILHKQGLLKDKRATAHPSVSDKVNDEAINGAKVVIDGNLITSEGLATATYFALAIVSKLFGNGRARSVAKGLVFEYPK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3002 445 Pfam DJ-1/PfpI family 59 223 IPR002818 -
Pvu3g3002 445 Pfam DJ-1/PfpI family 263 424 IPR002818 -
Pvu3g3002 445 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 42 443 - -
Pvu3g3002 445 CDD GATase1_DJ-1 61 224 - -
Pvu3g3002 445 Gene3D - 52 254 IPR029062 -
Pvu3g3002 445 Gene3D - 257 444 IPR029062 -
Pvu3g3002 445 SUPERFAMILY Class I glutamine amidotransferase-like 58 240 IPR029062 -
Pvu3g3002 445 CDD GATase1_DJ-1 264 426 - -
Pvu3g3002 445 PANTHER PROTEIN DJ-1 HOMOLOG C 42 443 - -
Pvu3g3002 445 TIGRFAM not_thiJ: DJ-1 family protein 264 437 IPR006287 -
Pvu3g3002 445 TIGRFAM not_thiJ: DJ-1 family protein 60 235 IPR006287 -
Pvu3g3002 445 SUPERFAMILY Class I glutamine amidotransferase-like 263 442 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g3002 Pvu-Chr3 51753237 51757233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3002 - - gmx:100777134 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g3002 3 51753237 51757233 Pvu3g3002 3 51753237 51757233 ECH