Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2851 ATGGCCACAACCCCCAAATCACAATGCATTTGTTTTTTTGCCCTAATTCTGTTAGGAATAATCTTTGATCTGTTCATCTTCTCCGAAGCCACTACTCTCGAACTCATTCTCACTGATTCCCCTCTCTCTCCCTTCTACGACCCTTCACTCACCAACTCCGATCGCTTGCGCAGTGCTTTTCAAAGCTCGTTGAAGCGCGCGAAACGTTTCAGAGTCCCTGTTGCTAACCTTAACCATGGCAACACACAGTCTCCTATGACAACCGACATTGCATCATACTTAATGAAATTCTCCATCGGAACTCCACCGGTTGAAGCTTTCGGCATAGCTGACACCGGCAGTGACCTCATATGGACGCAGTGCCTCCCATGCAAACAGTGCTACAACCAAACTGCTCCTCTCTTTGACCCTTCCTATTCCAAATCATACACCAACTTGCCATGCAATTCCTCGTTCTGCAACCCAAGATCTCTAAATCATCCAGAATGTGACCAGAATGGGTCGTGTGTGTATCACTATTCTTACTACGATCATTCTCACACTGGGGGAAACCTTGCCACTGAAACCCTAACCATAGGCGAGGAAAACCCTATTACTTTTCCCAACACTGTGTTTGGGTGTGCACACGACAGTGGTGGCACGTTCAATCACATGGCGACAGGAATCATTGGTCTTGGTCTTGGCAACCTTTCACTGCTTTCTCAACTTGGTATCAGAAAGTTATCTTATTGTCTTGCTCCCAACAACATGAACTCCACCAGCAAGATTGTGTTCGGTGAAGATGCTGTGGTTTCTGGTGCTGAAGTGGTGAGCACTCCTTTTAGAGTGGATTTTGCTCCTGAGTACATAATCACGTTGGAGGGTTTCAGTGTGGAAGGAGATAGGGTTGAGTTCGAGTCTGCAAGCAATGTGAGTGAGGGGAACATGGCCATTGATTCTGGAACAACGCTTACTTTACTGCCACATGCCATTTATGATGGTTTGGTGGCTGCTTTGGACAGGAGAATAAAGGCTCCAAAGGGGAAGGACCCCGATGGTGTTCTTGATCATTGTTATGAATTTGCTGATCAGAACGTGTCGTTTCCCATAATCACAGCACATTTCAAGGGAGCAGATGTGCAGTTGATGGGGATTAATACGTTCTATTGGGTGAGTGAGAAAGTGGTGTGTTTGTCCATGATTCCTAGTAAAGTTGGTTTCTTTGGGAACATTGCTCAGACGAATTTCTGGATTGGATATGATCTTGATGCTGCTACTGTCTCCTTTAAGGCGGCTAATTGTTCCCTATGA 1290 0.4589 MATTPKSQCICFFALILLGIIFDLFIFSEATTLELILTDSPLSPFYDPSLTNSDRLRSAFQSSLKRAKRFRVPVANLNHGNTQSPMTTDIASYLMKFSIGTPPVEAFGIADTGSDLIWTQCLPCKQCYNQTAPLFDPSYSKSYTNLPCNSSFCNPRSLNHPECDQNGSCVYHYSYYDHSHTGGNLATETLTIGEENPITFPNTVFGCAHDSGGTFNHMATGIIGLGLGNLSLLSQLGIRKLSYCLAPNNMNSTSKIVFGEDAVVSGAEVVSTPFRVDFAPEYIITLEGFSVEGDRVEFESASNVSEGNMAIDSGTTLTLLPHAIYDGLVAALDRRIKAPKGKDPDGVLDHCYEFADQNVSFPIITAHFKGADVQLMGINTFYWVSEKVVCLSMIPSKVGFFGNIAQTNFWIGYDLDAATVSFKAANCSL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2851 429 Pfam Xylanase inhibitor C-terminal 281 423 IPR032799 -
Pvu3g2851 429 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 20 428 - -
Pvu3g2851 429 SUPERFAMILY Acid proteases 88 427 IPR021109 -
Pvu3g2851 429 Gene3D Acid Proteases 263 428 IPR021109 -
Pvu3g2851 429 ProSiteProfiles Peptidase family A1 domain profile. 93 423 IPR033121 -
Pvu3g2851 429 CDD pepsin_A_like_plant 93 427 IPR034161 -
Pvu3g2851 429 Pfam Xylanase inhibitor N-terminal 93 259 IPR032861 -
Pvu3g2851 429 Gene3D Acid Proteases 61 260 IPR021109 -
Pvu3g2851 429 PANTHER OS07G0603500 PROTEIN-RELATED 20 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2851 Pvu-Chr3 50255976 50257265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2851 90 427 Miscellaneous Gene Families AT1G77480 23.733 4.46e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2851 - - var:108328338 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2851 3 50255976 50257265 Pvu3g2851 3 50255976 50257265 ECH