Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2850 ATGAGAATCACCACCAAATCAAAACCCCTTCACTTTGCCCTAATTCTCTTAGGAGTCCTTGATTTCTTAATCTTCTCTGAAGCCACCACCCATGTTCTCATTCACCGTGATTCCCCTTTATCTCCCCTCTACGACCCTTCAAGCACCCCCTTTGATCGCTTGCACAATGCTTTTCAACGCTCATTCAAGCGCATCAACCGTTTCAAAGTTGCTGCTGCTGATAACCCTAAACATGGCAGCATTCAGGCCCCTATGAAACCTGGTGGTGGAGAGTATCTCATGAAGCTCTTCATTGGAACTCCACCTGTTGAAGTAATTGGCATAGCTGACACGGGTAGTGACCTTATATGGACACAGTGTTTGCCATGCATAGAATGTTACAATCAAACTATTCCCTTCTTTGACCCTAGTCGTTCCAAATCATACCAGACAATACCATGCCTACCTACAGTTTGCAGCAAAGTACTAGGCTCAGAAAATACTCTATGTGACATTACGACAACATGTGGTTATAGGTATTCTTATGCAGATGGTTCTCACACTGCGGGAAACCTTGCTTTTGAGACACTAACCTTAGGCATCACAAACCCAATTTCTCTTCCAAAAGTTGCATTTGGTTGTGCACACGATACTGGTGGCATATTTGATGCGTCAGGTTCAGGCATAATTGGTCTTGGAAGTGGCAACCTTTCACTGATTTCTCAATTGGGTCCTCATGGTGGCAAGAAATTCTCCTATTGTCTGATTCCCACTTCCATGAACAAGAACTCCACCAGCAAGATTAATTTTGGAAGCGATTCTTTGGTTTCTGGACCTGAAGTCGTAACAACTCCTCTTACTATAGTTCCTTCTGGCTTTTACTTCACATGGGAGGCCATTAGTGTGGGAAAACAGAGGATTGAATTTGCATCAAATGGTAATGTTACCACAGGAAATGTGGTCCTTGATACTGGAACAACATTTACTCTTTTGCCATTGGATGTTTATAGTGGTTTGGTACATGCTTTAGGTCAAGTAATAAGGGCTAAAATGGTGCGTGATCCTAAGGGTATTCTTGATCTTTGTTATGAGAGCAGTGTCAATAATATTAAACTCCCCATTATCACAGCACATTTGAAGGGAGGGGATGTGATTTTGCAGCCAGTGAATACATTTTCGTGGGTGGAGAAGAATGTGGTGTGTTTAACCATGCTTGCAAGCGACATAAGTATTTTAGGAAACTTGGCTCAGACCAATTTCTTCGTTGGGTATGACCTTGAGTCAAGCACTTTGTCCTTTAAGCCCACTGATTGTAGCAAGATATAA 1305 0.4245 MRITTKSKPLHFALILLGVLDFLIFSEATTHVLIHRDSPLSPLYDPSSTPFDRLHNAFQRSFKRINRFKVAAADNPKHGSIQAPMKPGGGEYLMKLFIGTPPVEVIGIADTGSDLIWTQCLPCIECYNQTIPFFDPSRSKSYQTIPCLPTVCSKVLGSENTLCDITTTCGYRYSYADGSHTAGNLAFETLTLGITNPISLPKVAFGCAHDTGGIFDASGSGIIGLGSGNLSLISQLGPHGGKKFSYCLIPTSMNKNSTSKINFGSDSLVSGPEVVTTPLTIVPSGFYFTWEAISVGKQRIEFASNGNVTTGNVVLDTGTTFTLLPLDVYSGLVHALGQVIRAKMVRDPKGILDLCYESSVNNIKLPIITAHLKGGDVILQPVNTFSWVEKNVVCLTMLASDISILGNLAQTNFFVGYDLESSTLSFKPTDCSKI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2850 434 SUPERFAMILY Acid proteases 87 432 IPR021109 -
Pvu3g2850 434 Pfam Xylanase inhibitor C-terminal 287 427 IPR032799 -
Pvu3g2850 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 26 432 - -
Pvu3g2850 434 Gene3D Acid Proteases 264 434 IPR021109 -
Pvu3g2850 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Pvu3g2850 434 Gene3D Acid Proteases 69 263 IPR021109 -
Pvu3g2850 434 CDD pepsin_A_like_plant 91 431 IPR034161 -
Pvu3g2850 434 ProSiteProfiles Peptidase family A1 domain profile. 92 427 IPR033121 -
Pvu3g2850 434 Pfam Xylanase inhibitor N-terminal 92 265 IPR032861 -
Pvu3g2850 434 PRINTS Pepsin (A1) aspartic protease family signature 98 118 IPR001461 GO:0004190|GO:0006508
Pvu3g2850 434 PRINTS Pepsin (A1) aspartic protease family signature 313 324 IPR001461 GO:0004190|GO:0006508
Pvu3g2850 434 PRINTS Pepsin (A1) aspartic protease family signature 403 418 IPR001461 GO:0004190|GO:0006508
Pvu3g2850 434 PANTHER OS07G0603500 PROTEIN-RELATED 26 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2850 Pvu-Chr3 50243419 50244959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2850 90 434 Miscellaneous Gene Families AT1G77480 27.540 1.08e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2850 - - aprc:113871763 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2850 3 50243419 50244959 Pvu3g2850 3 50243419 50244959 ECH