Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2849 ATGGCATTGTTGCCACAAACGCGTCACTCTCTCTCTCTATGCTCACCGCGTTACCCTTATCACTTCCCAAACCCTTATTATCACAATCCCTTTCTCATAATCCCCGCCACATCCACCAAATCCCTATCCTCATTTCATGCCCCAACAATTTCATTCTCTGCTCACCCAACTACCTCACGCGCTTCGCCGCCCTCACGCACTGCCTCTGCTTCTTCGCCACCTCCGCAAACGCAACTTCTCAAGGCTTTCGCGGGCCTCGCCGCCTCCGCCGTGCTGTTTCTCTGCTTCGGCGTTCGCCTGTGCTTGGCCTCTTCGCCGCCGCCGCCTCTACCTGCCGGTCCTACCGTTGTTCAAGAGGAGCAAACTGTTCAAGATGATCAGGATGGAAGAAAACAAGATGACAAAGAAACTACAGTAGATAGAGAATTAGAAGAAGCTTTTAATACCTGGAAATCTAAATCATTTGCGTTGACTGTTCCCCTGAAAGTTGTTGCTCTTCGTGGTTCTATACCTCCTTCATGGATCAAGGACTTTATAAATTGTCAAGGGAGGAGAATGAAGTTTAACGTGAAGTATTACGCAAGTCTTGAGAGCATCTTTTCTGACCTAACAATTCCCTTTACTAAAGGAAAAATTGGTCCAGCATCTGCTTTGGCAGCAGATATTGTTGGTATTGGCGATTCATGGCTCAAATCTGCTATTACTAAAGCTATAATTGAGCCAATAAGAGATGTAGAAGATCAGGAGTGGTTTAAAAGCTTAAATGACAAATGGAAGGTATACCTACGCAGGAACTCTGAGGGAGAAATAGATCCTAAAGGTGATATATGGGCTGCTCCATATCGATGGGGCTGTATGGTAATAGCATACAAGACAAATAAATTTCAAGAGCATAAGTTGGCTCCTGTAGAGGACTGGGCAGATCTTTGGCGGCCTGATCTTGCCGGGAGGATTTCAATGGTTGATTCTCCTAGAGAAGTTGTTGGTGCAGTTTTGAAGTATATGGGGACTTCCTATAATACAATTGACATCAATGCTGAAGTAAATGGTGGGAGAGACGCTGTTAAACATAATTTGGCTTTGCTCGCAAAACAGGTTCGACTGTTTGATAGTTCAAACTATCTAAAAGCTTTTGGAGTTGGAGACGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGCCGCTAAACGCCTGTCTGATGTTGCTGTTGTTGTTCCAAAGTCTGGAGCGAGCTTATGGGCAGATCTTTGGGCAATTCCGGCTGCATCTAGGATTGAAACAAATCGGATTGGTGGACGTGTCAGGGGACCGTCCCCATTAATCCATCAGTGGATTGAGTTTTGTCTGCAATCTGCAAGAGCTCTCCCCTTTAAGCAAGAGGTGATCCCAGGTGCCTCTCCCTCACATCTTCAAGTTCATTCAGCCAATGTGCCCGTCGAGTTAACCAATGGTAGGCCAAAGCTAAAGGGTAACCTAGTTGATGGAGCACCTCCACCAGACATCTTAGAAAGGTGTGAGTTTCTAGAGCCATTATCTAATTCGTCATTGTCAGATTACCATTGGTTGATTACCTCTATCCAGGAACCTGGCCATGGATTGATACACAAAATGTATCATAATATCATATCAGTGGCTAAATTTTCTGGGTGGTTTAATTCAAAACTTACTTGA 1677 0.4496 MALLPQTRHSLSLCSPRYPYHFPNPYYHNPFLIIPATSTKSLSSFHAPTISFSAHPTTSRASPPSRTASASSPPPQTQLLKAFAGLAASAVLFLCFGVRLCLASSPPPPLPAGPTVVQEEQTVQDDQDGRKQDDKETTVDRELEEAFNTWKSKSFALTVPLKVVALRGSIPPSWIKDFINCQGRRMKFNVKYYASLESIFSDLTIPFTKGKIGPASALAADIVGIGDSWLKSAITKAIIEPIRDVEDQEWFKSLNDKWKVYLRRNSEGEIDPKGDIWAAPYRWGCMVIAYKTNKFQEHKLAPVEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGTSYNTIDINAEVNGGRDAVKHNLALLAKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRLSDVAVVVPKSGASLWADLWAIPAASRIETNRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQVHSANVPVELTNGRPKLKGNLVDGAPPPDILERCEFLEPLSNSSLSDYHWLITSIQEPGHGLIHKMYHNIISVAKFSGWFNSKLT* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2849 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 275 291 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pvu3g2849 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 304 318 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pvu3g2849 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 322 341 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pvu3g2849 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 408 427 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pvu3g2849 558 Pfam Bacterial extracellular solute-binding protein 220 455 - -
Pvu3g2849 558 Gene3D - 284 435 - -
Pvu3g2849 558 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 71 541 - -
Pvu3g2849 558 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 71 541 - -
Pvu3g2849 558 MobiDBLite consensus disorder prediction 111 138 - -
Pvu3g2849 558 CDD PBP2_PotD_PotF_like_1 160 526 - -
Pvu3g2849 558 MobiDBLite consensus disorder prediction 54 74 - -
Pvu3g2849 558 MobiDBLite consensus disorder prediction 123 138 - -
Pvu3g2849 558 SUPERFAMILY Periplasmic binding protein-like II 161 426 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2849 - - gmx:100781794 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2849 3 50236803 50242396 Pvu3g2849 3 50236803 50242396 ECH