Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2798 ATGAGAACTTTCTCAAACAACTTCTTCACCAAAGCCCGCAACCTTGTAGGCTTCGGGCTCGCTTCCACCGCCGCCGCAGCCACAATCGCCGCCTCCAATTCCTCCGTCTCTTCTTCCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCATCCACCGCCTCTTCCACCTCTTCTTTCGATGCCCACGATTCTTCTTCTTCCGATGTCGAAATCGTTCCCCAGAAAGTACTGAAAACGAAGCTCTGCATCATCGGAAGCGGCCCGGCGGCGCACACGGCCGCCATTTACGCGGCGCGAGCGGAGCTGAAGCCGGTCCTCTTCGAAGGATGGATGGCGAATGGCGTCGCACCCGGCGGCCAGCTCACCACCACCACCGACGTTGAGAACTTTCCGGGATTTCCGGCTGGCATCCTCGGCGCCGAGCTCATGGACCGCTGTCGCGAGCAGTCACAGCGCTTCGGCGCTGAGATCATTACGGAGACAGTGACGACAGTGGATTTCTCCGAACGGCCGCTTAGGGTTTTCACCGACTCCACCACCGTGGAAGCTGAATCCGTCATCGTCGCCACCGGCGCTGTTGCTAAGCGGCTAAATTTCGTCGGCGCGGGTGACGGTCCCGACGGTTTCTGGAACCGCGGGATATCGGCGTGCGCCGTGTGTGACGGTGCCGCGCCGATATTCCGTGGCAGGCCTCTGGCGGTGATCGGCGGCGGAGATTCTGCTATGGAGGAAGCTGGCTTCCTCTCCAAGTTTGGTTCCAAGGTTTATGTAATTCATAGAAGGGACAAGTTTAAGGCTTCTAAGATCATGCAGGGGAAACTGATGAATAATCCCAAAATTGAAGTGTTGTGGAATTCAACAGTGGTTGGGGCTTATGGGGATAAGAAGGGTGGGGTTCTTGGTGGGTTGAAGGTGAAGAATGTGGTGACTGGGATTGTGTCTGATTTAAAGGTTTCTGGTTTGTTCTTTGCAATTGGGCATGAGCCTGCCACGAAATTCTTGGATGGTCAACTTGAATTAGACTCTGATGGGTACATTGTGACCAAACCTGGCACCACAAAGACTAGTGTTGATGGAGTTTTTGCTGCTGGTGATGTGCAGGATAAGAAGTATAGGCAAGCTATTACCGCAGCTGGAACTGGGTGTATGGCAGCCTTGGATGCAGAACATTACTTGGAAGAGATTGGTTTGCAGGATGGTAGGAGTGTTTGA 1215 0.5383 MRTFSNNFFTKARNLVGFGLASTAAAATIAASNSSVSSSASSSSSSSSSPSSTASSTSSFDAHDSSSSDVEIVPQKVLKTKLCIIGSGPAAHTAAIYAARAELKPVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGAELMDRCREQSQRFGAEIITETVTTVDFSERPLRVFTDSTTVEAESVIVATGAVAKRLNFVGAGDGPDGFWNRGISACAVCDGAAPIFRGRPLAVIGGGDSAMEEAGFLSKFGSKVYVIHRRDKFKASKIMQGKLMNNPKIEVLWNSTVVGAYGDKKGGVLGGLKVKNVVTGIVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLEEIGLQDGRSV* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2798 404 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 81 393 IPR005982 GO:0004791|GO:0005737|GO:0019430
Pvu3g2798 404 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 79 400 - -
Pvu3g2798 404 PANTHER THIOREDOXIN REDUCTASE 79 400 - -
Pvu3g2798 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 82 101 - -
Pvu3g2798 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 184 202 - -
Pvu3g2798 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 232 250 - -
Pvu3g2798 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 319 335 - -
Pvu3g2798 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 346 368 - -
Pvu3g2798 404 SUPERFAMILY FAD/NAD(P)-binding domain 75 393 IPR036188 -
Pvu3g2798 404 Gene3D - 84 392 IPR036188 -
Pvu3g2798 404 Gene3D - 200 331 IPR036188 -
Pvu3g2798 404 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 218 240 IPR008255 GO:0016491
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 81 103 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 119 134 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 140 150 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 185 193 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 211 223 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 228 252 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 280 296 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 321 342 - -
Pvu3g2798 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 356 374 - -
Pvu3g2798 404 MobiDBLite consensus disorder prediction 36 66 - -
Pvu3g2798 404 Pfam Pyridine nucleotide-disulphide oxidoreductase 81 381 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2798 Pvu-Chr3 49804811 49807701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2798 K00384 - gmx:100794363 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1229 2 24149251 24154956 Pvu3g2798 3 49804811 49807701 PCT