Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2779 ACTGGTGGAAATTCATCGGATGGATTGAAAGCTAGTGATGTAGATCCACGGTTGGTATTTCATCATGGGGTGCCATCTGGTGGTACCAATTTCGCCTATGACACCATTCAGAGGATACTGGCTCTTTCTACAAAGGATGGCCAGATTAAACTCTATGGAAAAGATAATGCTCAAGCCATGCTTGAATCCAGTGAAGCCCAGCCTAGCAAGTTTCTACAGTTCATCCAGAACCAAGGTGTCCTTATAAATGTTACTTCCAATGACCATATTGAGGTTTGGGACATAGACAAGAAATCGCTGTCTGATGTGTATATTGCTAAAGAAGAAATCACATGCTTTGTAGTCATTCAACATAGCCTCTATATGTACATCGGACATTCTAATGGTGATATTTCAGTTTTGATGCTTGATCAAGAACCATCATGGCGTTTGGTTAAAATGAAATACGTCATACCTCTCTCAGCTTCATATGGTAACTCTGAAGTGTCTGATGATACTGTTGTGACGCACGTACTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCATAATCTTTAGAAATGGTCAAATGATATTATGGGATGTTCAGGAAAGTAGATCTATCTTAAGAACTGGTGGAAGTAAGTTGCAGCCACTGCATAATGAAACAAAAAAAGTGACTTCGGCATGTTGGGTGTGTCCATTTGGAAGTAAAGTGGCTATAGGGTACAACAACGGAGAGCTCTTCATTTGGAGAATCCCTTCTCTAAATATAGGAAATGTCTCAGCATCTGAATGTATTAATCAAAACACTCCATTTCTCAAACTTAACTTAGGATACAAGTCAGAAAAAATCTCCATAGGATCAATAAAATGGGTTTATGCTGGAGGAAAGGCTAGTCGATTATATGTTATGGGAGCTTCTGACTATGCATCTTCAAACTTGTTGCAGGTAGTGTTGCTGAATGAGAATACAGAATCTCGCACAATTAAACTTGGACTTCATCTGTCTGAATGTTGTACCGACATGGAGATCATATCATTAACTTCAACTGAGCAAAGCAAGCATAAACAAGATTCTTTTATTTTGCTTGGGAAGTCAGGCCATCTATATATGTATGACGATAGTTTGATTGAGAAGTATCTGCTACAATGCCAATCTAATAAGTCCACACCTTCACTTCCAAGGGAAGTAATTGTGAAGTTACCACTGGCAGAAGCAAGCATCACAACAGCAAAATTTATCTCCAACAATTCTACTAATGTGTTTAATTCTGAAGATGAGTATTACACACAGCTGTTCAAAAACTATCCATTGTTTGTGCCTGTTGAAACAAATCAGAAGGATGGAATCATCCTAAGTTCGGCCAAATTTACAGGATTTTCCAAAGTTCAAAACTTGTACATAACTGGACACAGCAATGGAGCCATAACCTTCTGGGATGCTTCATGCCCCATTTTCACTCCGATTTTGCAATTGAAGCAACAGAGTGAAAATGACTGTTCATTGAGTGGTATACCGTTGACAGCATTATACTTTGATATCAATTCTCCAGTTCTTGCTTCTGGTGACCAAAGTGGAATGATTTGCATCTTTAGATTCAAACCTGAACCATATGCCACCAACAGCTTCATGTCTCTTACTGGGGGTACAAAGAAAGGGACTGATCATATAATCCAAAGTGTGAAACATGTAAAGAGTACTGGTGCCATTTTATCAATGAACATAGATCCCAGTTCAATGCATCTTGCTGTTGGTTCTGATCAAGGACATGTTTCAGTTTTTAACCTAGATGGGCCAACTTTGTTATACCAGAAACATATTACGAGTGAAATTTCTGCTGGTATCATCTCTCTGCAGTTCCTAACCTGCAGTTTACATGGTTTTGAAAAGAACATTTTAGCAGTTGGAACAAAAGATTCATCTGTTATGGCACTAGATAAAGAAAATGGAAACACACTAGGCACAGGAACTATTTCTCCTAAGAAGCCCTCTAAAGCTTTATTTATGAAGGTTTTGGATGGACAAGGTGAACAGGTCACAGGATCAATTACAAAAGATGGATTAGACTTGAGTGAAAAGAACCATATTGACGATGCAACAACGAAGCAGCAGTACATTCTGCTTTGTTCTGAGAAAGCTTTATATGTCTATTCATTGGTGCATGCGATTCAGGGAGTTAAGAAGGTGCTATACAAGAAAAAGTTTCATTCCTCTTCATGTTGCTGGGCATCAACATTTTACAGTCATTCTGATGTTGGCCTTATACTTATTTTCACTAGTGGAAAAGTAGAATTAAGGTCTTTGCCAGAGTTATCCCTGGTTGTGGAGACTTCAATTAGAGGTTTCAGTTACACTCCTCCAAAATCAAAGCCATTTTCTGAGAGCCAGATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCATTGTTGGTCCAAAGGAATATTTTCAGGCTTTTGGACTCTATTAGCTGCATCTACAGGAAAGGAATGATGTTTTCACAAGAAGAGCTTGTCCCTAGCCCAGTCATAAATAAGGAAAAGAAAAGGGGTATATTCAGCTCTGTCATCAAAGATTTTACTGGCAGTAAAGAAAAGCATGCTCCCATCTTGGAAACAGAAGAATCTAAAGAAACTATCCAGAAACTCTCAGCTATCTTTTCAACTGAAAATTTTCCATGTGATGCTGTTAATAATGATAATCTGACTGTTGATGAAGAGCTTGAATTAAATATAGATGACATTGACCTAGATGATCATGAAGAAAAACGAAAAGATCAAGGTATAATGGGAAGTTTTAACAAGAAGAAATTGCCTGGAAAGTTTGAGGCTCTAAAAGGAAGGTTAAAAGAGATGAAGGGCAAAATTCAGAAAACATCGGGTAAAGAAGAACAAGATGAGCAAGCGGGTGCAGTCGATCAAATTAAGAAGAAATATGGGTTTTCATATTCCAATTCCAATGAAACAGGCGTAGTTAAATTGGCACAAAGCAAGTTGCAGGAGAACATGAAAAAGTTGCAGGGAATCAATCTCAGAACAACAGAAATGCAAGATGAAGCAAAATCCTTTTCATTATTGGCAAACCATGTACTGCGGACTGCTGAACAGGATAGACAAAATTAA 3135 0.3821 TGGNSSDGLKASDVDPRLVFHHGVPSGGTNFAYDTIQRILALSTKDGQIKLYGKDNAQAMLESSEAQPSKFLQFIQNQGVLINVTSNDHIEVWDIDKKSLSDVYIAKEEITCFVVIQHSLYMYIGHSNGDISVLMLDQEPSWRLVKMKYVIPLSASYGNSEVSDDTVVTHVLPQPAAESKRVLIIFRNGQMILWDVQESRSILRTGGSKLQPLHNETKKVTSACWVCPFGSKVAIGYNNGELFIWRIPSLNIGNVSASECINQNTPFLKLNLGYKSEKISIGSIKWVYAGGKASRLYVMGASDYASSNLLQVVLLNENTESRTIKLGLHLSECCTDMEIISLTSTEQSKHKQDSFILLGKSGHLYMYDDSLIEKYLLQCQSNKSTPSLPREVIVKLPLAEASITTAKFISNNSTNVFNSEDEYYTQLFKNYPLFVPVETNQKDGIILSSAKFTGFSKVQNLYITGHSNGAITFWDASCPIFTPILQLKQQSENDCSLSGIPLTALYFDINSPVLASGDQSGMICIFRFKPEPYATNSFMSLTGGTKKGTDHIIQSVKHVKSTGAILSMNIDPSSMHLAVGSDQGHVSVFNLDGPTLLYQKHITSEISAGIISLQFLTCSLHGFEKNILAVGTKDSSVMALDKENGNTLGTGTISPKKPSKALFMKVLDGQGEQVTGSITKDGLDLSEKNHIDDATTKQQYILLCSEKALYVYSLVHAIQGVKKVLYKKKFHSSSCCWASTFYSHSDVGLILIFTSGKVELRSLPELSLVVETSIRGFSYTPPKSKPFSESQICCSSKGDLVLVNGDQEIFVVSLLVQRNIFRLLDSISCIYRKGMMFSQEELVPSPVINKEKKRGIFSSVIKDFTGSKEKHAPILETEESKETIQKLSAIFSTENFPCDAVNNDNLTVDEELELNIDDIDLDDHEEKRKDQGIMGSFNKKKLPGKFEALKGRLKEMKGKIQKTSGKEEQDEQAGAVDQIKKKYGFSYSNSNETGVVKLAQSKLQENMKKLQGINLRTTEMQDEAKSFSLLANHVLRTAEQDRQN* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2779 1044 Gene3D - 20 286 IPR015943 GO:0005515
Pvu3g2779 1044 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 2 1043 - -
Pvu3g2779 1044 Pfam Lethal giant larvae(Lgl) like, C-terminal 703 820 IPR013905 -
Pvu3g2779 1044 CDD R-SNARE_STXBP5_6 990 1032 - -
Pvu3g2779 1044 SUPERFAMILY WD40 repeat-like 562 811 IPR036322 GO:0005515
Pvu3g2779 1044 Gene3D - 452 830 IPR015943 GO:0005515
Pvu3g2779 1044 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 2 1043 - -
Pvu3g2779 1044 SMART WD40_4 490 527 IPR001680 GO:0005515
Pvu3g2779 1044 SMART WD40_4 389 475 IPR001680 GO:0005515
Pvu3g2779 1044 SMART WD40_4 549 590 IPR001680 GO:0005515
Pvu3g2779 1044 SMART WD40_4 206 246 IPR001680 GO:0005515
Pvu3g2779 1044 SUPERFAMILY WD40 repeat-like 71 639 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2779 Pvu-Chr3 49609017 49617009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2779 - - gmx:100793138 1766.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2779 3 49609017 49617009 Pvu3g2779 3 49609017 49617009 ECH
Pvu2g1205 2 23673909 23677226 Pvu3g2779 3 49609017 49617009 PCT