Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2727 CAAAAATCTTCAATTTTCACCTTTTCTCCCGATTGTTGGGCCTTCTGGATCTTTTTCTTTTCTTCTCTAATATGTTGCAAGTGCTATATGGACACAACAGGTACTCAAAGGAGCTTTGCGAAGGATTTATGGGTTGATAAATACAAGCCCAATTCACTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGATGTTAAGACGTGGTTTGAAGAGAGGTTGAAACCTTCGAAGGGTGTCTACAATAATAATGTTCTCCTCGTCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCATCTCATCTGGGAGCAGTAGTTTATGGGTGGAACACACCTACACCTGTAATTTGGCAGGAGCATCTCTATAATTCTGGCACAGGGACTCAATACACATCCAAGTTAGATGAATTTGAAAGTTTCGTTGAGAGAGTACGAAAATATGGATTATTGCTAACTTCCTATACTGGGGAGTCAAAGCCTCCCATCATACTTTTAATAGACGATCTTCCCATGACTAATGGGAAGTCTGCTTTTGGAAGACTTAAAAATTGCTTGCAATTTTTGGTGAAATCAACTCAGATACCCACAGCAATATTGTTAACTGACTATGGAAATGCTGACTCAGTAGATTATAATGCTCGTTGCCTGGAAGAACTGAAGCTATCTCTAGAGAGTTCTGGGGCTTGTAAGGTTGCTTTCAATCCAATTACAGCAAATTCTATGAAGAAAATTCTTTTTAGAATATGCCAAGTGGAGCAGTGCGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAAACAAGTGGAGGTGACATCAGACATGCAATCACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTAGTGCATTCTTTGGCCTCATCTACTTGCTCTCATGGTCCATTGAAAGAGGAAAGTAATAAACCTGTTAGATCAGATTATGGATATTCATTGCACTTTGGCAGAGATGAAGCATTATCTCTATTTCACGCTTTGGGGAAATTTTTGCATAATAAAAGGGAGACTGGAGTTGCAACAGAATATGATGGATTTCTTATTCGAGAAAGACTTTCAAGATTACCATTAAAAATGGATGTCCCTGAGAAGATTCTTGGTCAAGCCCATGTGCAACCTGGTTCAGTTGCTGATTTTCTGCATGAAAATGTTCTGGATTTTTTGGATGATGAGGCAATAGATGACGCATGGACTCTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTACTAAACAACGGGGTAGTTATAACGAGGCAGAGGGTGTTTTACAGTCAGCTGCTGCATCCATAGCTGTTCGTGGGGTGCTATTTGGAAATTCTAATCCACTATCCTCCAGGTGGCATGCAGTTCGGCGACCAAGGCTCTGGCAAGTTGAGAAAGCATCATTATACAAGAATGAGGTGGATAGGCTCAGAATCCCTGCCTGTAAACGGTTTAGTTCTTATCATATGTCAATTATGGCCACTGAGTACATGCCCATGCTTAAATTGCTCGGAAATAGAGCATGTGGTGGATATGATGGACCGAGTCAGGAATCATTACGGAACTTGGAAATGGAAGACTTTGATTTCGACAAAATGGATTTAGATGAACAATCTAGGGGCATTTCCGATGATGACATAGAAGATTGGTAG 1668 0.4035 QKSSIFTFSPDCWAFWIFFFSSLICCKCYMDTTGTQRSFAKDLWVDKYKPNSLEELAVHKKKVEDVKTWFEERLKPSKGVYNNNVLLVSGQAGVGKSAAIHVIASHLGAVVYGWNTPTPVIWQEHLYNSGTGTQYTSKLDEFESFVERVRKYGLLLTSYTGESKPPIILLIDDLPMTNGKSAFGRLKNCLQFLVKSTQIPTAILLTDYGNADSVDYNARCLEELKLSLESSGACKVAFNPITANSMKKILFRICQVEQCDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPNLVHSLASSTCSHGPLKEESNKPVRSDYGYSLHFGRDEALSLFHALGKFLHNKRETGVATEYDGFLIRERLSRLPLKMDVPEKILGQAHVQPGSVADFLHENVLDFLDDEAIDDAWTLSSYLGDADILLTKQRGSYNEAEGVLQSAAASIAVRGVLFGNSNPLSSRWHAVRRPRLWQVEKASLYKNEVDRLRIPACKRFSSYHMSIMATEYMPMLKLLGNRACGGYDGPSQESLRNLEMEDFDFDKMDLDEQSRGISDDDIEDW* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2727 555 Pfam Rad17 P-loop domain 41 210 - -
Pvu3g2727 555 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 39 555 - -
Pvu3g2727 555 Gene3D - 41 222 IPR027417 -
Pvu3g2727 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 290 IPR027417 -
Pvu3g2727 555 CDD HLD_clamp_RFC 241 286 - -
Pvu3g2727 555 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 39 555 IPR004582 GO:0006281
Pvu3g2727 555 Gene3D - 243 301 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2727 K06662 - gmx:100799826 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2727 3 49206047 49209912 Pvu3g2727 3 49206047 49209912 ECH