Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2726 ATGCAAGACATGTGGAATGTTCCTCCGGGTTTCAGACCCTCCAAATCTGCACCTTCTTCTCCTGCGAAGCCTCTTGGAGCAGTTCTCAGAACTCGCTCTGAGTCCTTCCATGTCACTCACAAAGTCCCAGTTGGTGACACTCCTTATGTCAGAGCAAAAAACGTTCAGTTGGTGGATAAGGATCCGGAGAAAGCAATTCCACTGTTTTGGGCAGCCATTAATGCTGGAGATAGAGTGGACAGTGCTTTGAAAGACATGGCTATTGTCATGAAGCAGCAAAATCGGGCTGGAGAAGCCATTGAAGCCATTAAATCTCTTCGTAGTAGATGTTCAGATCAAGCCCAAGAATCTCTTGATAACATCCTCTTGGATCTTTACAAGAGGTGTGGAAGACTTGATGATCAAATAGCCCTCTTGAAGCACAAGTTGTACTTAATTCAACAAGGGTTGGCATTCAATGGTAAGCGTACAAAGACTGCAAGATCTCAAGGGAAGAAGTTCCAAGTCTCTGTGGAGCAAGAAGCTACGAGATTGCTGGGAAACTTGGGATGGGCGCTGATGCAGCAGAACAACTACATTGAAGCAGAAGAGGCATATCGCAGGGCACTGTCTATAGCTCCTGACAACAATAAGATGTGCAATCTAGGCATTTGTTTGATGAAGCAAGGAAGAATTGGTGAGGCAAAAGAGACACTGTACAGGGTAAAGCCTGCAGTTATGGATGGCCCTAGAGGCTCAGATTCTCATTTGAAAGCCTATGAAAGGGCACAGCAGATGCTGAAGGACCTTGAATCCGAGATGATGAACAAGGGAGTTGATAGGATTGAACAAAGCAGACTCTTTGAGGCCTTTTTGGGTTCTTCATCAATATGGCAACCCCAGCCTTGCAAGGACCACCACACAACCTTGTCAGCAGCAACAAATTCAGCAAGAAATCATGAAGATTTTGCTGATGAGAACATCAGTTCCAACATAATGGCCAAAAATCACACAACATTGCCCCCGTCTAAGGCTACCTCTACCGCTACCAACAAACAAATCATTGCCATGTTGGGGAACTCACTCAATGTTGCAGCTCCTCCGTTTTATGCAACAAAATCTGTGTTGAGAGAACCATTTGAGAACCATTCTGAGACCCTTAAGAGAACAAGGTCTGGAAATGCTGCAGGGTCCATGAGAGTAGTTAGTGATGTGAGGGACAGCAACAACAAGTTGCATGTGGAATTAGGAGTGGCAGTGCCAGAGAACAAAACAAGAAGGCTCTCATCAGAGGATGATGGTGAGAAGAACAAGTTAACAGATTTGTTACCTGATGATGATGACTTTGAAGAGGCCATTCTTGCTGCAATTTTGGGACCCTCCAATGATCATAAAGCCAATGAGACAAGCAGAATCTTGCAGAGGAATAATGACAAGAGGCTTAAGGTTTTTAAGGACATCACACTATCTCTGAGTCCAAGAGCCTGA 1467 0.4479 MQDMWNVPPGFRPSKSAPSSPAKPLGAVLRTRSESFHVTHKVPVGDTPYVRAKNVQLVDKDPEKAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAGEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLKHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEEAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAVMDGPRGSDSHLKAYERAQQMLKDLESEMMNKGVDRIEQSRLFEAFLGSSSIWQPQPCKDHHTTLSAATNSARNHEDFADENISSNIMAKNHTTLPPSKATSTATNKQIIAMLGNSLNVAAPPFYATKSVLREPFENHSETLKRTRSGNAAGSMRVVSDVRDSNNKLHVELGVAVPENKTRRLSSEDDGEKNKLTDLLPDDDDFEEAILAAILGPSNDHKANETSRILQRNNDKRLKVFKDITLSLSPRA* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2726 488 SMART tpr_5 176 209 IPR019734 GO:0005515
Pvu3g2726 488 MobiDBLite consensus disorder prediction 1 25 - -
Pvu3g2726 488 PANTHER PROTEIN POLLENLESS 3-LIKE 2 4 485 - -
Pvu3g2726 488 MobiDBLite consensus disorder prediction 418 435 - -
Pvu3g2726 488 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Pvu3g2726 488 Gene3D Tetratricopeptide repeat domain 54 237 IPR011990 GO:0005515
Pvu3g2726 488 PANTHER PROTEIN POLLENLESS 3-LIKE 2 4 485 IPR044961 -
Pvu3g2726 488 SUPERFAMILY TPR-like 57 283 IPR011990 GO:0005515
Pvu3g2726 488 Coils Coil 246 273 - -
Pvu3g2726 488 MobiDBLite consensus disorder prediction 416 435 - -
Pvu3g2726 488 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Pvu3g2726 488 ProSiteProfiles TPR repeat region circular profile. 176 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2726 Pvu-Chr3 49202715 49204868 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2726 - - gmx:100803414 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2726 3 49202715 49204868 Pvu3g2726 3 49202715 49204868 ECH