Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2705 ATGGGCATAAGAAAATCCAACCAAGCAGAAGTGGTGAAGCAAATAGTGAGAAGGTGTTCAAGTTTTGGAAAGAAACAGGGCTACAATGAAGAGGGTCTTCCTGAAGATGTGCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTGCCTCATCCACAGTTTCAGACTCTTCTCCAAAGAGCTGAAGAGGAGTTTGGGTTCAATCATGACATGGGCCTTACAATCCCATGTGATGAACTTGTTTTTGAGTTTCTTACCTCCATGATTAGATGA 306 0.4183 MGIRKSNQAEVVKQIVRRCSSFGKKQGYNEEGLPEDVPKGHFAVYVGENRTRYIVPISWLPHPQFQTLLQRAEEEFGFNHDMGLTIPCDELVFEFLTSMIR* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2705 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 101 IPR003676 GO:0009733
Pvu3g2705 101 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 5 101 - -
Pvu3g2705 101 Pfam Auxin responsive protein 24 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2705 Pvu-Chr3 49033068 49033742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2705 34 100 Calmodulin-binding Proteins AT3G43120 50.746 3.23e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2705 K14488 - gmx:100500218 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1131 2 22331727 22332609 Pvu3g2705 3 49033068 49033742 PCT