Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2686 ATGGCAGTTCCAGAGAGGAACCATAACCGTTTTTATCATCTTCATCATCATCATCAACATCAAGTTTTCTCAGTGTTAATCGTTCTATTCCTCATCCACGTGGACAATGCTCTCTGCATCAGATTTCCCGATCGGGTCGCCCCACCCGCCCTCCACCAATCCGACCAACAGCGCTTGCAGGTGGCTGTCTTCGCCCTCGGGAGCTTCTGGCGATCCGAAGCCGTCTTCGGCTGCTTGCCCGGCGTTGTTCACACTACCGTTGGCTACGCCGGCGGATCCAAGTCCAACCCCGAATACCGAAGCTTGGGTGACCATGCGGAATGCGTCAAGGTTGAGTATGATCCACAGCAGAATAGTTTTAGGGATCTACTGGATGTCTTTTGGTCTAACCATGATCCTAGGCAAGTGTATGGCCAAGGTCCTGATGTGGGTAAACAATACAGATCTATTATTTTTGTCAATGGAACTGAAGAATCAAGAATGGCTTCTGTCAGCAAAGAGCAGGAACAAACCAGGTCAAGAAGCAGCATCGTGACTACTCAAATTCTACAACTTGGAACATTTTACCCTGCAGAGCCTGATCACCAGAAATTTGAACTCAAGCAAAATACCATTCTTCTTCAATTAATTGGCAACCTTCCTGCCGAGGAGCTTGAGAGGTCTAGCCTGGCAACGAAATTGAATGGATATGTAGCAGAGCTTTGCCCTCCTAATATCCAAAAGCGTATTGATGCCAAGATCAATGATATTATCAAAAGGGGTTGGCCAATTTTGAGGGAGTTGTAG 786 0.472 MAVPERNHNRFYHLHHHHQHQVFSVLIVLFLIHVDNALCIRFPDRVAPPALHQSDQQRLQVAVFALGSFWRSEAVFGCLPGVVHTTVGYAGGSKSNPEYRSLGDHAECVKVEYDPQQNSFRDLLDVFWSNHDPRQVYGQGPDVGKQYRSIIFVNGTEESRMASVSKEQEQTRSRSSIVTTQILQLGTFYPAEPDHQKFELKQNTILLQLIGNLPAEELERSSLATKLNGYVAELCPPNIQKRIDAKINDIIKRGWPILREL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2686 261 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 20 260 - -
Pvu3g2686 261 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 59 213 IPR002569 GO:0008113
Pvu3g2686 261 Pfam Peptide methionine sulfoxide reductase 62 202 IPR002569 GO:0008113
Pvu3g2686 261 Coils Coil 261 261 - -
Pvu3g2686 261 Gene3D Peptide methionine sulphoxide reductase MsrA 54 254 IPR036509 GO:0008113
Pvu3g2686 261 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 20 260 - -
Pvu3g2686 261 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 61 201 IPR002569 GO:0008113
Pvu3g2686 261 SUPERFAMILY Peptide methionine sulfoxide reductase 51 202 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2686 Pvu-Chr3 48892468 48897015 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2686 K07304 - gmx:100782739 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2686 3 48892468 48897015 Pvu3g2686 3 48892468 48897015 ECH