Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2677 ATGAGGATGAGAGAACATGATGGGGTGATCACAACAGCGTTAACGTTGTTGCTGTTTCTTTCTTTTCCTGCGTTCAGTTACGGACTTCTTCCTCCTCGTACGCTGCTCAGTAAGCTGTCTAAGGGAACTTTTCTCACCACTCGGGAGCTCTGGTTTCACCAAACCCTAGATCACTTCTCTCCCCATGATCACCGTGAATTTGCGCAACGATACTATGAGTTTGTAGAATATTTTGAGATTTCTGATAGACCAATTTTCTTGGTAATCGGTGGTGAAAGTGAATTGATGGGGATTGAGAATGACTATGTTGGTGTGCTGGCAAAGAAGTTTGGAGCAGCTATAGTTTCTGTTGAACATCGCTACTATGGAAAGAGTTCCCCATTTGATTCTTTGGAGACACAAAATTTGAAATATCTTTCATCCAAGCAGGCACTTTTTGATTTGGCTGTTTTTCGTCAGTATTATCAGAATTCCTTAAATGCAAAGCTTAATGGAACAAAAATTGAAAACTCCTGGTTCGTTTTTGGTGGCTCGTATGCTGGAGCACTCAGTGCATGGTTCCGTCTCAAGTTTCCCCATTTAACATGTGGAAGTCTGGCAAGTTCTGCAGTTGTTCTTTCTGTTTATAACTACACAGAATATGATCAGCAGGTTGGTACCTCAGCTGGTGCTGAATGTAAAGCAGTATTACAAGAAACTACTCAACTCATTGAGCACAAACTTGCAAGCAATGGAGAGGAACTGAAGGCATCTTTTAATGCAGATGATCTTGAAAGAGATGGAGACTTTATGTATTTAGTGGCTGATGCTACTGCTTTAGCAATTCAAAATGGAACTCCTGATAAATTATGCAATCCTATGGTTAAAACAAAGAAGGCAGGAGAAGACTTGGTGGATGCTTATGCCAAGTATGTCAAAGAGTTCTTCTTTGGAACCTTTGGTTTTAATGTACAGATTTATGACCAGGAGTACTTAAAAAAAACTTCTATCAATGAAGACAGTTCTACTAGATTATGGTGGTTTCAAGTTTGTACTGAAGTTGCAAACTTTCAGGTGGCTCCATCAAATGATAGTATTCGCTCCTCAAAACTTGACACAAAATACCACTTGGACCTTTGCAGAAATGTCTTTGGAGAGGGTGTCTTCCCTGATGTGGATGAAACTAATTTATACTACGGAGGCACAAATATTGCTGGTTCGAAGATAATATTTTCAAATGGCTCACAGGATCCTTGGCGTCATGCATCCAAACAAACTCCATCTACTGATCTGCCTTCCTACACTATCACATGTTTTAATTGTGCTCATTGCACTGATTTACGAGGATGTCCTCTGTTTCCTTTGACCCTTGAAGGTAATGAGAACTACTGCTCCTCCCCTCATGCAGTTCGCAAAGTCAGGCTACAGATTTCAAAACATATGGAATTGTGGCTATCTGAGTGCGATGCAGGGAAGAGTTATATGTGA 1467 0.4049 MRMREHDGVITTALTLLLFLSFPAFSYGLLPPRTLLSKLSKGTFLTTRELWFHQTLDHFSPHDHREFAQRYYEFVEYFEISDRPIFLVIGGESELMGIENDYVGVLAKKFGAAIVSVEHRYYGKSSPFDSLETQNLKYLSSKQALFDLAVFRQYYQNSLNAKLNGTKIENSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSAVVLSVYNYTEYDQQVGTSAGAECKAVLQETTQLIEHKLASNGEELKASFNADDLERDGDFMYLVADATALAIQNGTPDKLCNPMVKTKKAGEDLVDAYAKYVKEFFFGTFGFNVQIYDQEYLKKTSINEDSSTRLWWFQVCTEVANFQVAPSNDSIRSSKLDTKYHLDLCRNVFGEGVFPDVDETNLYYGGTNIAGSKIIFSNGSQDPWRHASKQTPSTDLPSYTITCFNCAHCTDLRGCPLFPLTLEGNENYCSSPHAVRKVRLQISKHMELWLSECDAGKSYM* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2677 488 SUPERFAMILY alpha/beta-Hydrolases 112 362 IPR029058 -
Pvu3g2677 488 Gene3D Serine carboxypeptidase S28, SKS domain 210 363 IPR042269 -
Pvu3g2677 488 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 34 484 - -
Pvu3g2677 488 Pfam Serine carboxypeptidase S28 54 442 IPR008758 GO:0006508|GO:0008236
Pvu3g2677 488 PANTHER OS10G0511600 PROTEIN 34 484 - -
Pvu3g2677 488 Gene3D alpha/beta hydrolase 51 442 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2677 Pvu-Chr3 48779028 48784205 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2677 - - gmx:100806381 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2677 3 48779028 48784205 Pvu3g2677 3 48779028 48784205 ECH