Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2664 ATGGTAGCCATAATGTTCCTTCTCATTTTCTCATCTCTTACCTCAATTTTGGAGCCATGTCACGTGGTGGACAAAGAAGCATTACTAGAATTCAAGAGCAGGATCATCTCTGACCCTTCAAATCTGCTAGATTCGTGGACACCTTCCTCTGACTGCTGCCACAATTGGGAAGGCATCGCATGTGGTTCCACTGGCAGGGTCATCAACCTTACTAGAACAGGCGTTGTGTTCGACGTTGATGACATCCCTCTAGAAACTTACATGTCAGGAACACTATCTCCTTATCTTGGAAACTTGTCTAGTTTGCAAGTTTTGGACCTCAGCAATCTGAAGCACTTGCATGGTCCAATACCGCCAGAACTTGCCGAGTTATCCCACTTGAGAAAACTTTTTCTCTATTCAAATGAGTTCTCAGGTGGTGTACCAGCATCTTTTGAAAAGCTTTCACGGCTTCAGAGTTTGTACCTCGATAACAACCAGTTGTTTGGTAATGTTCCTTTTTCTGTCTTTGCCTCCTTGAAGTCTCTTTCAGAACTTGGTCTATCTGGGAACAAGCTTTCTGGGGGGATTCCTTCTTCCATTGGAAGAATGGCATTTCTCACTAGGCTTCACCTTCATCAAAACAATTTTCATGGAAGCATTCCTTCTAGCATTGGAAATCTTGTAAACCTCAAGGACTTGGATTTCTCTTATAATCAGATTAGTGGAAGAATCCCAGAGTCAATTGGGAGACTTTCACAGTTGGTTTTTCTTGATCTGATGCATAATAATTTCTCAGGAAACCTCCCTTTTTCTATTGGGGATTTAAGTTCTCTTAAGTTTTGCAGTTTAGCAGAGAACAAGCTAACAGGCGTTTTGCCTTATTCCATTGGAAAACTCCGCAATGTGCAAAGGGTAATCCTCGAGAACAATAAACTCACTGGGAAGTTACCTTCCACCATTGGGCATCTAGCTAGTTTAACTGATTTATTTCTCGCAAACAATGAATTCAGTGGCAAAATTCCACCTTCCTTTGGCCATTTAATCAACCTGCAAACACTGGATTTGTCAAGAAACCAACTTTGTGGTCCACTTCCCCCTCAACTTGCTAAACTACAGAGTTTGCAAACTTTAGACTTGTCATTCAACCCATTAGAACTAGCCAAAGTACCCAATTGGGTTTCCAAGTTGAGAGTTTTTCAGTTGAAATTGGCCAAGACGGGGATCAAAGGCCAACTTCCAAAGTGGCTTGCATATTCATCAGTGTCAACCCTTGATTTGTCAAGCAATGCATTAACGGGGAAACTGCCATGGTGGATTGGAAACATGACTCGCCTGTCCTTCCTGAACCTCTCAAACAACGACTTTCATTCGTCAATCCCAGAGGCATTCAAGGGACTTTCTTCTCTGATGGACCTTGACCTCCATTCCAATAAGCTCACAGGGTCTCTAAGAGTGGTGTTTGAGAAAGAGGTTCAATTTTCACTAGGCCATTTCAACTCCCTCGACCTATCTAACAACAAGTTTTGTGGTCCCATTGACGACAACATTGGGCAAAAGGCCTCAATGAGTTCAATCATATATCTTGCATTGTCACACAACCCTTTGGGAGGATCTATACCAAAGTCAATTGGGAAACTGAGAGAATTGGAAATTCTGGACCTTGAAGACTGTGAACTCTCGGGGAATATACCTGAAGAGCTTGGCGATGCTGAAACGTTAACAAAGATTAATCTTTCAAAGAACAAATTAAGTGGCAATATACCAGAGAAGGTCCTAAATTTGAAGAAGCTTGAAGAGTTCGATGTGTCAAGGAACAGACTCAGAGGGAGGATCCCTCCACATAAGGCCATGTTTCCTATTTCAGCTTTTGTGGGTAATCGTGGATTGTGTGGACCACCACTTCCTCCTTGTAAACTTAGTTATAGATAA 1911 0.4218 MVAIMFLLIFSSLTSILEPCHVVDKEALLEFKSRIISDPSNLLDSWTPSSDCCHNWEGIACGSTGRVINLTRTGVVFDVDDIPLETYMSGTLSPYLGNLSSLQVLDLSNLKHLHGPIPPELAELSHLRKLFLYSNEFSGGVPASFEKLSRLQSLYLDNNQLFGNVPFSVFASLKSLSELGLSGNKLSGGIPSSIGRMAFLTRLHLHQNNFHGSIPSSIGNLVNLKDLDFSYNQISGRIPESIGRLSQLVFLDLMHNNFSGNLPFSIGDLSSLKFCSLAENKLTGVLPYSIGKLRNVQRVILENNKLTGKLPSTIGHLASLTDLFLANNEFSGKIPPSFGHLINLQTLDLSRNQLCGPLPPQLAKLQSLQTLDLSFNPLELAKVPNWVSKLRVFQLKLAKTGIKGQLPKWLAYSSVSTLDLSSNALTGKLPWWIGNMTRLSFLNLSNNDFHSSIPEAFKGLSSLMDLDLHSNKLTGSLRVVFEKEVQFSLGHFNSLDLSNNKFCGPIDDNIGQKASMSSIIYLALSHNPLGGSIPKSIGKLRELEILDLEDCELSGNIPEELGDAETLTKINLSKNKLSGNIPEKVLNLKKLEEFDVSRNRLRGRIPPHKAMFPISAFVGNRGLCGPPLPPCKLSYR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2664 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Pvu3g2664 636 Pfam Leucine rich repeat 200 258 IPR001611 GO:0005515
Pvu3g2664 636 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Pvu3g2664 636 Gene3D Ribonuclease Inhibitor 192 283 IPR032675 -
Pvu3g2664 636 SUPERFAMILY L domain-like 34 379 - -
Pvu3g2664 636 PRINTS Leucine-rich repeat signature 344 357 - -
Pvu3g2664 636 PRINTS Leucine-rich repeat signature 365 378 - -
Pvu3g2664 636 Gene3D Ribonuclease Inhibitor 22 191 IPR032675 -
Pvu3g2664 636 Gene3D Ribonuclease Inhibitor 284 382 IPR032675 -
Pvu3g2664 636 Gene3D Ribonuclease Inhibitor 383 635 IPR032675 -
Pvu3g2664 636 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 3 632 - -
Pvu3g2664 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 632 - -
Pvu3g2664 636 SUPERFAMILY L domain-like 287 608 - -
Pvu3g2664 636 SMART LRR_typ_2 173 197 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 341 364 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 317 340 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 221 245 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 124 147 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 436 459 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 588 619 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 148 172 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 365 390 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 540 564 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 293 316 IPR003591 -
Pvu3g2664 636 SMART LRR_typ_2 460 483 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2664 Pvu-Chr3 48700425 48702588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2664 22 634 Receptor kinase-like Gene Family AT4G08850 34.238 3.86e-92 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2664 - - gmx:102664464 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2664 3 48700425 48702588 Pvu3g2664 3 48700425 48702588 ECH